BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035345
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               64   1e-08
emb|CCH50966.1| T4.5 [Malus x robusta]                                 64   1e-08
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]    62   6e-08
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    59   4e-07
emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]    59   5e-07

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = +1

Query: 76  GKTENGLYPFTFNTSALQSTSPSAFLSTKATFSTWHQRLGHPSSAVLHQVLNQNKLMIQH 255
           GK+ENGLYPF F +   + +S  A++S++ +  TWH RLGH SS ++ +VL+ NK +   
Sbjct: 453 GKSENGLYPFRFPSKTSKVSSSLAYVSSRVSAETWHSRLGHASSTIVSKVLS-NKAVPVL 511

Query: 256 SEKSSSFCNDC 288
              + SFC  C
Sbjct: 512 GSSNFSFCQSC 522


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
 Frame = +1

Query: 31  YSIWDIAIQRTTFRGGKTENGLYPFTFNTSALQS---TSPSAFLSTKATFSTWHQRLGHP 201
           + + D++  +  F+G  +E GLYPF +N S   S    SP+A +  KA   TWH+RLGHP
Sbjct: 681 FYVKDLSTGKMLFQG-PSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHP 739

Query: 202 SSAVLHQVLNQNKLMIQHSEKSSSFCNDC 288
           S   LH V+++N L +     + S C  C
Sbjct: 740 SGGTLHSVVHKNHLPVIGYVNNMSVCTAC 768


>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
          Length = 879

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = +1

Query: 61  TTFRGGKTENGLYPFTFNTSAL-QSTSPSAFLSTKATFSTWHQRLGHPSSAVLHQVLNQN 237
           TT   GK+E GLYP    + ++ +S + SA +  KA+ S WH RLGH S  ++ Q+LN++
Sbjct: 240 TTLLEGKSEGGLYPIQLXSMSINKSHALSAVVGIKASVSIWHSRLGHASLPIVSQLLNKH 299

Query: 238 KLMIQHSEKSSSFCNDC 288
            L ++ S     FC  C
Sbjct: 300 SLPVEGSVNKMHFCESC 316


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = +1

Query: 76  GKTENGLYPF----TFNTSALQSTSPSAFLSTKATFSTWHQRLGHPSSAVLHQVLNQNKL 243
           G  ENGLYP     TF+ S    T  S  +  +A   TWH RLGHPSS + + + + NKL
Sbjct: 425 GVVENGLYPLAGCKTFHKSL---TCLSTTIGVRANADTWHSRLGHPSSVIFNSLFHSNKL 481

Query: 244 MIQHSEKSSSFCNDC 288
            ++ S     FC+ C
Sbjct: 482 SVKGSSTKLEFCSAC 496


>emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]
          Length = 791

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = +1

Query: 64  TFRGGKTENGLYPFTFNTSALQSTSPSAF---LSTKATFSTWHQRLGHPSSAVLHQVLNQ 234
           T   G ++ GLYP   N   L S+   AF   +  KA+ +TWH RLGHPSS+ LH VL+ 
Sbjct: 180 TLMTGPSDRGLYPI--NLQQLSSSKFHAFSMIVGVKASPATWHCRLGHPSSSTLHHVLHN 237

Query: 235 NKLMIQHSEKSSSFCNDC 288
             L I  S    S C  C
Sbjct: 238 YSLPISDSFNKKSICESC 255