BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035340
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   176   5e-42
emb|CBI22273.3| unnamed protein product [Vitis vinifera]              176   5e-42
ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   161   9e-38
ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ...   151   1e-34
gb|AAR88654.1| rRNA methylase-like protein [Viscum album]             149   6e-34

>ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
           vinifera]
          Length = 372

 Score =  176 bits (445), Expect = 5e-42
 Identities = 114/214 (53%), Positives = 137/214 (64%), Gaps = 10/214 (4%)
 Frame = +2

Query: 62  VLRTSLFSIENQLI--RTNTRPISLPRSSLFFPNSYSI--LPLVSPFSPYQQGLWFDCKR 229
           ++R S+ S+E  L+  + N   I LP    F P S S+    L+SP S    GL     +
Sbjct: 10  LVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL--TRHK 67

Query: 230 GSIRLYGCALRAVSNETTDHNVLEPGTEDINKDRVEELLKRKEDDIARLMKMERKSDIGS 409
              R Y     +V  ETTD   LE   +D NKD VE LL    DD+ RLMKMER+S  G 
Sbjct: 68  LHSRPYVHVAESVGVETTD---LE---DDSNKDIVEHLLTNT-DDVGRLMKMERRSMTGD 120

Query: 410 EG------RWFPYLDVFRAGKSFLTSEEILEAVDTLILDVRKERIRKVVENRSYSVCLVV 571
            G      RWFPYLD F+ G +FL+S EILEA+D  I++VRKER R VV++RSYSVCLVV
Sbjct: 121 GGELIQSKRWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLVV 180

Query: 572 EGLTDFGNVSATFRSADALGFQSVHVISCDSTKR 673
           EGL DFGNVSA FRSADALGFQSVHV+SCDS+KR
Sbjct: 181 EGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKR 214


>emb|CBI22273.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  176 bits (445), Expect = 5e-42
 Identities = 114/214 (53%), Positives = 137/214 (64%), Gaps = 10/214 (4%)
 Frame = +2

Query: 62  VLRTSLFSIENQLI--RTNTRPISLPRSSLFFPNSYSI--LPLVSPFSPYQQGLWFDCKR 229
           ++R S+ S+E  L+  + N   I LP    F P S S+    L+SP S    GL     +
Sbjct: 7   LVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL--TRHK 64

Query: 230 GSIRLYGCALRAVSNETTDHNVLEPGTEDINKDRVEELLKRKEDDIARLMKMERKSDIGS 409
              R Y     +V  ETTD   LE   +D NKD VE LL    DD+ RLMKMER+S  G 
Sbjct: 65  LHSRPYVHVAESVGVETTD---LE---DDSNKDIVEHLLTNT-DDVGRLMKMERRSMTGD 117

Query: 410 EG------RWFPYLDVFRAGKSFLTSEEILEAVDTLILDVRKERIRKVVENRSYSVCLVV 571
            G      RWFPYLD F+ G +FL+S EILEA+D  I++VRKER R VV++RSYSVCLVV
Sbjct: 118 GGELIQSKRWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLVV 177

Query: 572 EGLTDFGNVSATFRSADALGFQSVHVISCDSTKR 673
           EGL DFGNVSA FRSADALGFQSVHV+SCDS+KR
Sbjct: 178 EGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKR 211


>ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
           [Cucumis sativus]
          Length = 370

 Score =  161 bits (408), Expect = 9e-38
 Identities = 104/219 (47%), Positives = 129/219 (58%), Gaps = 15/219 (6%)
 Frame = +2

Query: 62  VLRTSLFSIENQLIRTNTRPIS--------LPRSSLFFPNSYSILPLVSPFSPYQQGLWF 217
           V R+SLF +++   R   R  S        LP  SLFF N +S                 
Sbjct: 7   VSRSSLFLLQSCSPRRTQRIFSSVFLPSLHLPSFSLFFTNRFSRS--------------- 51

Query: 218 DCKRGSIRLYGCALRAVSNETTDHNVLEPGTEDIN-KDRVEELLKRKEDDIARLMKMERK 394
           +    S R +     A S    +  V +    ++  +D VE LL    +D+ARLMKMER+
Sbjct: 52  NPNAVSTRCFASISAATSPLEVEDIVADVEPPEVRTQDTVEHLLTHS-NDVARLMKMERR 110

Query: 395 S------DIGSEGRWFPYLDVFRAGKSFLTSEEILEAVDTLILDVRKERIRKVVENRSYS 556
           S      +   +GRWFPYLD +  G S+L S EILEA+D+LILD RKER + VV NRSYS
Sbjct: 111 SVELDGAEYPHKGRWFPYLDKYSCGSSWLNSGEILEALDSLILDSRKERFKNVVRNRSYS 170

Query: 557 VCLVVEGLTDFGNVSATFRSADALGFQSVHVISCDSTKR 673
           VCLVVEGLTDFGNVSA FRSADALGFQSVHV+SCD++KR
Sbjct: 171 VCLVVEGLTDFGNVSAAFRSADALGFQSVHVVSCDASKR 209


>ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
           gi|223527332|gb|EEF29478.1| rRNA methylase, putative
           [Ricinus communis]
          Length = 334

 Score =  151 bits (381), Expect = 1e-34
 Identities = 77/122 (63%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
 Frame = +2

Query: 311 EDINKDRVEELLKRKEDDIARLMKMERKSDIGSEG-RWFPYLDVFRAGKSFLTSEEILEA 487
           +D   + VE LL  + DD+ RLMKMER+ D    G RWFPYLD ++ G   L+  E+LEA
Sbjct: 56  DDSKNETVEHLLSNR-DDVLRLMKMERRPDAEKSGSRWFPYLDRYKCGSGELSGSEVLEA 114

Query: 488 VDTLILDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVHVISCDST 667
           V   I++ RKER   VV+NRSYSVCLVVEGL+DFGNVSA FRSADALGFQSVHV+SCDS+
Sbjct: 115 VGPYIMEDRKERFANVVKNRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVVSCDSS 174

Query: 668 KR 673
           KR
Sbjct: 175 KR 176


>gb|AAR88654.1| rRNA methylase-like protein [Viscum album]
          Length = 368

 Score =  149 bits (375), Expect = 6e-34
 Identities = 84/156 (53%), Positives = 104/156 (66%)
 Frame = +2

Query: 206 GLWFDCKRGSIRLYGCALRAVSNETTDHNVLEPGTEDINKDRVEELLKRKEDDIARLMKM 385
           GL     R   R    +  A++ E +   V     E  +K+ VE+LL  + + + R+MKM
Sbjct: 56  GLSIYTPRAPSRFCSFSHGALALEISGDGVTSETLEGSSKETVEKLLSDRTN-VDRMMKM 114

Query: 386 ERKSDIGSEGRWFPYLDVFRAGKSFLTSEEILEAVDTLILDVRKERIRKVVENRSYSVCL 565
           ERK +     RWFPYLD+F+AG   L+S EILEA+D  IL  RKERI+ VV+NRSYSV L
Sbjct: 115 ERKLEATEHTRWFPYLDMFKAGNIDLSSSEILEALDPFILGSRKERIKDVVKNRSYSVWL 174

Query: 566 VVEGLTDFGNVSATFRSADALGFQSVHVISCDSTKR 673
           VVEG TDFGN+SA FRSADALG QSVHVISC S+KR
Sbjct: 175 VVEGATDFGNISAVFRSADALGLQSVHVISCGSSKR 210