BLASTX nr result

ID: Coptis25_contig00035337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035337
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB72466.1| putative protein [Arabidopsis thaliana]                75   5e-12
ref|XP_003528986.1| PREDICTED: uncharacterized protein LOC100778...    71   1e-10
ref|XP_004170395.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    70   2e-10
ref|XP_004137507.1| PREDICTED: uncharacterized protein LOC101221...    70   2e-10
ref|XP_003631787.1| PREDICTED: uncharacterized protein LOC100853...    70   2e-10

>emb|CAB72466.1| putative protein [Arabidopsis thaliana]
          Length = 377

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
 Frame = -1

Query: 449 ELYNFRHSSLRMVVERTIGLLKKRFACLRHAPHYDTSVHTKVILACCAIHNFLREENPXX 270
           EL+N RH+SLR V+ER  G+ K RF   + AP Y     T+++LAC  +HNFL +E    
Sbjct: 262 ELFNLRHASLRNVIERIFGIFKSRFLIFKSAPPYPFKTQTELVLACAGLHNFLHQE---- 317

Query: 269 XXXXXXXXXXXXXXDAGINEDDTNGNEDQQIP-------IDMVPAHGWTNWRDALALMMW 111
                         +  INE++++ NE+           ++        NWRD ++  MW
Sbjct: 318 ------CRSDEFPPETSINEENSDDNEENNYEENGDVGILESQQREYANNWRDTISHNMW 371

Query: 110 QDTMG 96
            D  G
Sbjct: 372 MDATG 376


>ref|XP_003528986.1| PREDICTED: uncharacterized protein LOC100778909 [Glycine max]
          Length = 387

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = -1

Query: 461 QDYKELYNFRHSSLRMVVERTIGLLKKRFACLRHAPHYDTSVHTKVILACCAIHNFLREE 282
           QD  EL+N RHS LR V++RT G+LK RF  L  AP Y      K+++A CA+HN++R E
Sbjct: 258 QDASELFNQRHSLLRHVIDRTFGILKARFPILMSAPSYPLQTQVKLVVAACALHNYIRRE 317

Query: 281 NP 276
            P
Sbjct: 318 KP 319


>ref|XP_004170395.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101221521
           [Cucumis sativus]
          Length = 392

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/62 (53%), Positives = 39/62 (62%)
 Frame = -1

Query: 461 QDYKELYNFRHSSLRMVVERTIGLLKKRFACLRHAPHYDTSVHTKVILACCAIHNFLREE 282
           QD KEL+N RHS LR   ERT   LK RF  L  AP Y      K+++A CAIHN++R E
Sbjct: 260 QDAKELFNLRHSLLRNATERTFEALKARFPILLSAPPYPLQTQVKLVVATCAIHNYIRRE 319

Query: 281 NP 276
           NP
Sbjct: 320 NP 321


>ref|XP_004137507.1| PREDICTED: uncharacterized protein LOC101221521 [Cucumis sativus]
          Length = 392

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/62 (53%), Positives = 39/62 (62%)
 Frame = -1

Query: 461 QDYKELYNFRHSSLRMVVERTIGLLKKRFACLRHAPHYDTSVHTKVILACCAIHNFLREE 282
           QD KEL+N RHS LR   ERT   LK RF  L  AP Y      K+++A CAIHN++R E
Sbjct: 260 QDAKELFNLRHSLLRNATERTFEALKARFPILLSAPPYPLQTQVKLVVATCAIHNYIRRE 319

Query: 281 NP 276
           NP
Sbjct: 320 NP 321


>ref|XP_003631787.1| PREDICTED: uncharacterized protein LOC100853519 [Vitis vinifera]
          Length = 414

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/115 (31%), Positives = 56/115 (48%)
 Frame = -1

Query: 455 YKELYNFRHSSLRMVVERTIGLLKKRFACLRHAPHYDTSVHTKVILACCAIHNFLREENP 276
           YKEL+N+RHSSLR ++ER  G+LK RF  LR  P Y  S    +++ACC +HN++R    
Sbjct: 291 YKELFNYRHSSLRNIIERCFGVLKTRFPILRMMPCYKPSRQPSIVVACCTLHNWIRLSTR 350

Query: 275 XXXXXXXXXXXXXXXXDAGINEDDTNGNEDQQIPIDMVPAHGWTNWRDALALMMW 111
                                E+++  + +  I +    A      +D +A +MW
Sbjct: 351 NDQLFREYEVEDLSIE----GEEESTSSRNHSIDLSYESAAAMAACKDQIAEVMW 401


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