BLASTX nr result

ID: Coptis25_contig00035324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035324
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24067.3| unnamed protein product [Vitis vinifera]              171   4e-41
ref|XP_002266058.1| PREDICTED: microtubule-associated protein SP...   171   4e-41
ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, ...   164   5e-39
ref|XP_002308133.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_004139086.1| PREDICTED: microtubule-associated protein TO...   158   5e-37

>emb|CBI24067.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/111 (76%), Positives = 97/111 (87%)
 Frame = +2

Query: 2   LVIVKPLFEALGEQNRQVQTGSALCLASVIDNAVSPPVSVLSRMLTRITKFLKNPHFMAK 181
           + +VKPLFEALGEQN+QVQ+GSALCLA +IDN   PP+S+L RMLTRI K LKNPHFMAK
Sbjct: 146 VTLVKPLFEALGEQNKQVQSGSALCLARIIDNTNDPPISILQRMLTRIIKLLKNPHFMAK 205

Query: 182 PAVIELIRSIVQAGGTPTQSGLSAAVRNIEEALKNSDWTTRKAASVALAGI 334
           PAVIEL RSI+QAGG PTQ+ LSAA+ +I+EALKNSDWTTRKAASVAL  I
Sbjct: 206 PAVIELNRSIIQAGGAPTQNVLSAAITSIQEALKNSDWTTRKAASVALGEI 256


>ref|XP_002266058.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
           vinifera]
          Length = 838

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/111 (76%), Positives = 97/111 (87%)
 Frame = +2

Query: 2   LVIVKPLFEALGEQNRQVQTGSALCLASVIDNAVSPPVSVLSRMLTRITKFLKNPHFMAK 181
           + +VKPLFEALGEQN+QVQ+GSALCLA +IDN   PP+S+L RMLTRI K LKNPHFMAK
Sbjct: 146 VTLVKPLFEALGEQNKQVQSGSALCLARIIDNTNDPPISILQRMLTRIIKLLKNPHFMAK 205

Query: 182 PAVIELIRSIVQAGGTPTQSGLSAAVRNIEEALKNSDWTTRKAASVALAGI 334
           PAVIEL RSI+QAGG PTQ+ LSAA+ +I+EALKNSDWTTRKAASVAL  I
Sbjct: 206 PAVIELNRSIIQAGGAPTQNVLSAAITSIQEALKNSDWTTRKAASVALGEI 256


>ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus
           communis] gi|223532788|gb|EEF34566.1|
           Microtubule-associated protein TORTIFOLIA1, putative
           [Ricinus communis]
          Length = 840

 Score =  164 bits (416), Expect = 5e-39
 Identities = 83/112 (74%), Positives = 95/112 (84%)
 Frame = +2

Query: 2   LVIVKPLFEALGEQNRQVQTGSALCLASVIDNAVSPPVSVLSRMLTRITKFLKNPHFMAK 181
           +++VKPLFEALGEQN+Q+Q GSALCLA VIDN   PPV +L RMLTR  K LKNPHFMAK
Sbjct: 154 VLLVKPLFEALGEQNKQMQFGSALCLARVIDNTHDPPVPILQRMLTRTIKLLKNPHFMAK 213

Query: 182 PAVIELIRSIVQAGGTPTQSGLSAAVRNIEEALKNSDWTTRKAASVALAGIA 337
           PAVIEL RS++QAGG P+ S LSAA+ +I+EALKNSDWTTRKAAS ALA IA
Sbjct: 214 PAVIELNRSVIQAGGAPSHSVLSAAMTSIQEALKNSDWTTRKAASAALAEIA 265


>ref|XP_002308133.1| predicted protein [Populus trichocarpa] gi|222854109|gb|EEE91656.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/112 (73%), Positives = 95/112 (84%)
 Frame = +2

Query: 2   LVIVKPLFEALGEQNRQVQTGSALCLASVIDNAVSPPVSVLSRMLTRITKFLKNPHFMAK 181
           +++VKPLFEALGEQN+QVQ+GSALCLA VIDN+  PPVS+L RML R  K LKNPHFMAK
Sbjct: 147 VMLVKPLFEALGEQNKQVQSGSALCLARVIDNSHDPPVSILQRMLARTIKLLKNPHFMAK 206

Query: 182 PAVIELIRSIVQAGGTPTQSGLSAAVRNIEEALKNSDWTTRKAASVALAGIA 337
           PA IEL RSI+ AGG P+Q+ LSAA+ +I+EALKNSDWTTRKAAS AL  IA
Sbjct: 207 PAAIELNRSIILAGGAPSQNILSAAMTSIQEALKNSDWTTRKAASAALGEIA 258


>ref|XP_004139086.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus] gi|449476175|ref|XP_004154662.1| PREDICTED:
           microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus]
          Length = 828

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/112 (68%), Positives = 93/112 (83%)
 Frame = +2

Query: 2   LVIVKPLFEALGEQNRQVQTGSALCLASVIDNAVSPPVSVLSRMLTRITKFLKNPHFMAK 181
           + +VKP+FEALGEQ++Q+Q+GSA CLA +IDN   PP+S+L RML R TK LKNPHFMAK
Sbjct: 147 VTLVKPIFEALGEQHKQMQSGSAFCLARIIDNTQDPPISILQRMLARTTKLLKNPHFMAK 206

Query: 182 PAVIELIRSIVQAGGTPTQSGLSAAVRNIEEALKNSDWTTRKAASVALAGIA 337
           PAVI+L RSI+QAGG   ++ LSAA+  I+EALKNSDWTTRKAASVAL  IA
Sbjct: 207 PAVIDLNRSIIQAGGASNRNVLSAAILGIQEALKNSDWTTRKAASVALGEIA 258


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