BLASTX nr result
ID: Coptis25_contig00035301
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035301 (598 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554... 56 4e-06 >ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1| F-box family-3 [Medicago truncatula] Length = 642 Score = 56.2 bits (134), Expect = 4e-06 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 2/144 (1%) Frame = -3 Query: 545 LKNLELVSVKFTVGNANEELRLNCPVLEILKMRKCSLNHLRNLTVLALILKRLELRSLYC 366 LK L + +V F N+ ++L CPVL+ L++ C H+ +++ L++L + L Sbjct: 338 LKTLVVTNVTFANENSAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLML 397 Query: 365 --DIDKPCTLKACTSNLNLLRCTVYEYIDYCLEGLLSLDDARIGLYTYAEEGSKYGVERK 192 D D LK NL L C I+ L SL DA I L G Y + Sbjct: 398 CVDYDHIMKLKIDAVNLLSLYCICNPIIEVIPVNLTSLVDAFIFL------GYVYPHDEP 451 Query: 191 KFAHCLIKVLSGIYSVKALSISTL 120 A C I++L G+ SVK+L ++ + Sbjct: 452 YAAQCSIELLKGLGSVKSLKLNDI 475