BLASTX nr result

ID: Coptis25_contig00035300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035300
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/73 (42%), Positives = 40/73 (54%)
 Frame = +2

Query: 146 MVSYTNCTPKQCIWTKPKEDTVKLNTDGALPDARTGSGGLIRDNEG*VIQAFAGSGGQ*C 325
           ++S    + + CIW KP    +KLNTDG++     G GGL+RDNEG  I AF        
Sbjct: 261 LISPVTGSIRWCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDD 320

Query: 326 VLYQELPAIHRGL 364
           +   EL AI RGL
Sbjct: 321 IFLVELWAIWRGL 333


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