BLASTX nr result

ID: Coptis25_contig00035289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035289
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27828.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002279848.1| PREDICTED: uncharacterized protein LOC100249...   174   7e-42
emb|CAN75850.1| hypothetical protein VITISV_041106 [Vitis vinifera]   173   2e-41
emb|CAN75851.1| hypothetical protein VITISV_041107 [Vitis vinifera]   162   3e-38
ref|XP_002279728.1| PREDICTED: uncharacterized protein LOC100259...   161   5e-38

>emb|CBI27828.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  177 bits (448), Expect = 1e-42
 Identities = 90/160 (56%), Positives = 115/160 (71%), Gaps = 6/160 (3%)
 Frame = +3

Query: 6   MINALHALNSLDGVLHLTAGPIHTIIRSPSFNFTHMLHGRYKSKNDLRSYSLHPEHLSVA 185
           M++ L+ L SLD VLHL+AGPIH   RS  F FTHMLH RY SK DL  YS HP H+SV 
Sbjct: 28  MMSGLNGLTSLDQVLHLSAGPIHRN-RSSMFKFTHMLHSRYSSKEDLSVYSGHPSHMSVV 86

Query: 186 NDIVNPICDDIMVLNWVA-HLHGPIVPPVGAVMRVSFFKLQED-----VLKIVGGIKDRF 347
            ++V PIC+D+M ++WVA ++ GP+VP  G+ MR++F +L ED     +L  +G IKD  
Sbjct: 87  KELVLPICEDVMAVDWVADNISGPVVPRPGSAMRLTFMRLNEDEEKAKILGAIGDIKDCL 146

Query: 348 GSNVQITFGENFSPAKAKGFSIGSLVIFPGFSELEAFDLN 467
           GS  Q+T+GENFSPA+AKGFSI S+ IFPG +ELEA D N
Sbjct: 147 GSLNQMTYGENFSPARAKGFSIASVAIFPGLNELEALDSN 186


>ref|XP_002279848.1| PREDICTED: uncharacterized protein LOC100249118 [Vitis vinifera]
          Length = 261

 Score =  174 bits (441), Expect = 7e-42
 Identities = 91/163 (55%), Positives = 115/163 (70%), Gaps = 9/163 (5%)
 Frame = +3

Query: 6   MINALHALNSLDGVLHLTAGPIHTIIRSPSFNFTHMLHGRYKSKNDLRSYSLHPEHLSVA 185
           M++ L+ L SLD VLHL+AGPIH   RS  F FTHMLH RY SK DL  YS HP H+SV 
Sbjct: 67  MMSGLNGLTSLDQVLHLSAGPIHRN-RSSMFKFTHMLHSRYSSKEDLSVYSGHPSHMSVV 125

Query: 186 NDIVNPICDDIMVLNWVA-HLHGPIVPPVGAVMRVSFFKL--------QEDVLKIVGGIK 338
            ++V PIC+D+M ++WVA ++ GP+VP  G+ MR++F +L        +E VL  VG IK
Sbjct: 126 KELVLPICEDVMAVDWVADNISGPVVPRPGSAMRLTFMRLNEGLGDEEKEKVLGAVGEIK 185

Query: 339 DRFGSNVQITFGENFSPAKAKGFSIGSLVIFPGFSELEAFDLN 467
           D  GS  Q+T+GENFSPA+AKGFSI S+ IFPG +ELEA D N
Sbjct: 186 DCLGSLDQMTYGENFSPARAKGFSIASIAIFPGLNELEALDSN 228


>emb|CAN75850.1| hypothetical protein VITISV_041106 [Vitis vinifera]
          Length = 225

 Score =  173 bits (438), Expect = 2e-41
 Identities = 91/163 (55%), Positives = 114/163 (69%), Gaps = 9/163 (5%)
 Frame = +3

Query: 6   MINALHALNSLDGVLHLTAGPIHTIIRSPSFNFTHMLHGRYKSKNDLRSYSLHPEHLSVA 185
           M++ L+ L SLD VLHL+AGPIH   RS  F FTHMLH RY SK DL  YS HP H+SV 
Sbjct: 31  MMSGLNGLTSLDQVLHLSAGPIHRN-RSSMFKFTHMLHSRYSSKEDLSVYSGHPSHMSVV 89

Query: 186 NDIVNPICDDIMVLNWVA-HLHGPIVPPVGAVMRVSFFKL--------QEDVLKIVGGIK 338
            + V PIC+D+M ++WVA ++ GP+VP  G+ MR++F +L        +E VL  VG IK
Sbjct: 90  KESVLPICEDVMAVDWVADNJSGPVVPRPGSAMRLTFMRLNEGLGDEEKEKVLGAVGEIK 149

Query: 339 DRFGSNVQITFGENFSPAKAKGFSIGSLVIFPGFSELEAFDLN 467
           D  GS  Q+T+GENFSPA+AKGFSI S+ IFPG +ELEA D N
Sbjct: 150 DCLGSLDQMTYGENFSPARAKGFSIASIAIFPGLNELEALDSN 192


>emb|CAN75851.1| hypothetical protein VITISV_041107 [Vitis vinifera]
          Length = 225

 Score =  162 bits (410), Expect = 3e-38
 Identities = 85/162 (52%), Positives = 111/162 (68%), Gaps = 9/162 (5%)
 Frame = +3

Query: 9   INALHALNSLDGVLHLTAGPIHTIIRSPSFNFTHMLHGRYKSKNDLRSYSLHPEHLSVAN 188
           ++ L+ L SLD VLHL+AGPIH  + S +F FTHMLH RY SK DL  YS HP HL V  
Sbjct: 31  LSGLNGLASLDQVLHLSAGPIHRDLSS-AFKFTHMLHSRYSSKEDLSGYSGHPSHLRVVK 89

Query: 189 DIVNPICDDIMVLNWVAH-LHGPIVPPVGAVMRVSFFKLQ--------EDVLKIVGGIKD 341
           ++ +PI +D+M ++WVA  L GP+VP  G+ MR++  KL+         ++L  +G IKD
Sbjct: 90  ELGSPILEDLMAVDWVADDLSGPVVPRPGSAMRLTIMKLKGGLGDEEKANILGAIGDIKD 149

Query: 342 RFGSNVQITFGENFSPAKAKGFSIGSLVIFPGFSELEAFDLN 467
             GS  Q+T+GENFSPA+AKGFSI S+ IFPG +ELEA D N
Sbjct: 150 CLGSLNQMTYGENFSPARAKGFSIASVAIFPGLNELEALDSN 191


>ref|XP_002279728.1| PREDICTED: uncharacterized protein LOC100259336 isoform 1 [Vitis
           vinifera] gi|359484443|ref|XP_003633110.1| PREDICTED:
           uncharacterized protein LOC100259336 isoform 2 [Vitis
           vinifera]
          Length = 223

 Score =  161 bits (408), Expect = 5e-38
 Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 9/162 (5%)
 Frame = +3

Query: 9   INALHALNSLDGVLHLTAGPIHTIIRSPSFNFTHMLHGRYKSKNDLRSYSLHPEHLSVAN 188
           ++ L+ L SLD VLHL+AGPIH  + S +F FTHMLH RY SK DL  YS HP HL V  
Sbjct: 29  LSGLNGLASLDQVLHLSAGPIHRDLSS-AFKFTHMLHSRYSSKEDLSGYSGHPSHLRVVK 87

Query: 189 DIVNPICDDIMVLNWVAH-LHGPIVPPVGAVMRVSFFKLQ--------EDVLKIVGGIKD 341
           ++ +PI +D+M ++WVA  L GP+VP  G+ MR++  KL+          +L  +G IKD
Sbjct: 88  ELGSPILEDLMAVDWVADDLSGPVVPRPGSAMRLTIMKLKGGLGDEEKAKILGAIGDIKD 147

Query: 342 RFGSNVQITFGENFSPAKAKGFSIGSLVIFPGFSELEAFDLN 467
             GS  Q+T+GENFSPA+AKGFSI S+ IFPG +ELEA D N
Sbjct: 148 CLGSLNQMTYGENFSPARAKGFSIASVAIFPGLNELEALDSN 189


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