BLASTX nr result

ID: Coptis25_contig00035226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035226
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460107.1| hypothetical protein SORBIDRAFT_02g022870 [S...   106   2e-21
ref|XP_003576447.1| PREDICTED: ABC transporter A family member 7...   103   2e-20
tpg|DAA61152.1| TPA: hypothetical protein ZEAMMB73_440352 [Zea m...   102   3e-20
ref|XP_003572173.1| PREDICTED: ABC transporter A family member 7...   100   1e-19
dbj|BAC99368.1| putative ABC transporter [Oryza sativa Japonica ...    95   5e-18

>ref|XP_002460107.1| hypothetical protein SORBIDRAFT_02g022870 [Sorghum bicolor]
           gi|241923484|gb|EER96628.1| hypothetical protein
           SORBIDRAFT_02g022870 [Sorghum bicolor]
          Length = 910

 Score =  106 bits (265), Expect = 2e-21
 Identities = 46/86 (53%), Positives = 59/86 (68%)
 Frame = +1

Query: 1   VVIQNIANKEFNRAGLKCGCICTDTSRDGKCAKTECGIQYSDSVQAVFCPISKPPTWPVL 180
           +V+QNI N E ++   KCGC+C +TS DG+CA+ +CGIQYS   Q   CPI  PP WP +
Sbjct: 47  IVLQNIINNELDKPKYKCGCVCLETSLDGRCARKQCGIQYSTLDQVGSCPIPSPPQWPAM 106

Query: 181 STVPQHENRAVRTESIPFSDLPDESC 258
             +P+ + RAVRT S PFSDLPD  C
Sbjct: 107 IQIPRADFRAVRTFSQPFSDLPDPFC 132


>ref|XP_003576447.1| PREDICTED: ABC transporter A family member 7-like [Brachypodium
           distachyon]
          Length = 945

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/86 (54%), Positives = 55/86 (63%)
 Frame = +1

Query: 1   VVIQNIANKEFNRAGLKCGCICTDTSRDGKCAKTECGIQYSDSVQAVFCPISKPPTWPVL 180
           VV+QN+ N E ++    CGC C +T+ DG C K ECGIQYS   Q   C I+ PP WP L
Sbjct: 47  VVLQNVINNELDKPKYHCGCACVETNLDGSCKKRECGIQYSTLEQVWSCAITSPPRWPAL 106

Query: 181 STVPQHENRAVRTESIPFSDLPDESC 258
             VPQ E RAV+T S PF DLPD SC
Sbjct: 107 IQVPQPEFRAVKTLSQPFDDLPDPSC 132


>tpg|DAA61152.1| TPA: hypothetical protein ZEAMMB73_440352 [Zea mays]
          Length = 910

 Score =  102 bits (254), Expect = 3e-20
 Identities = 43/86 (50%), Positives = 57/86 (66%)
 Frame = +1

Query: 1   VVIQNIANKEFNRAGLKCGCICTDTSRDGKCAKTECGIQYSDSVQAVFCPISKPPTWPVL 180
           +V+QN+ N E ++   KCGC+C +TS +G+C + ECGIQYS   Q   CPI  PP WP L
Sbjct: 47  IVLQNVINSELDKPKYKCGCVCLETSANGRCVRKECGIQYSTLDQVGSCPIPSPPQWPAL 106

Query: 181 STVPQHENRAVRTESIPFSDLPDESC 258
             +P+ + RA RT S PF+DLPD  C
Sbjct: 107 IQIPRADFRAARTFSQPFNDLPDPFC 132


>ref|XP_003572173.1| PREDICTED: ABC transporter A family member 7-like [Brachypodium
           distachyon]
          Length = 954

 Score =  100 bits (249), Expect = 1e-19
 Identities = 42/86 (48%), Positives = 55/86 (63%)
 Frame = +1

Query: 1   VVIQNIANKEFNRAGLKCGCICTDTSRDGKCAKTECGIQYSDSVQAVFCPISKPPTWPVL 180
           V +Q   ++E ++   +CGC C DT+ DG C +TECGIQYS   Q   CPI  PP WP +
Sbjct: 50  VALQGAIDREIDKPKYRCGCACVDTAADGSCRRTECGIQYSTLDQVASCPIPNPPRWPAV 109

Query: 181 STVPQHENRAVRTESIPFSDLPDESC 258
             VP+ E+RA+RT S PF  LPD +C
Sbjct: 110 VQVPRPESRAIRTASQPFDGLPDPTC 135


>dbj|BAC99368.1| putative ABC transporter [Oryza sativa Japonica Group]
           gi|37806018|dbj|BAC99430.1| putative ABC transporter
           [Oryza sativa Japonica Group]
          Length = 929

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/86 (47%), Positives = 53/86 (61%)
 Frame = +1

Query: 1   VVIQNIANKEFNRAGLKCGCICTDTSRDGKCAKTECGIQYSDSVQAVFCPISKPPTWPVL 180
           VV+Q + N E N+   +CGC C D + DG C +TECG+++S   Q   CPI  P  WP L
Sbjct: 53  VVLQGVINHEINKPKYQCGCACVDAAPDGTCRRTECGVEHSTLDQVGSCPIKSPTPWPAL 112

Query: 181 STVPQHENRAVRTESIPFSDLPDESC 258
             VP+ E+RAVR  S PF  LPD +C
Sbjct: 113 VQVPRPESRAVRIASQPFDGLPDPTC 138


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