BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035223
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. ru...   142   3e-32
emb|CAN68477.1| hypothetical protein VITISV_029627 [Vitis vinifera]   137   7e-31
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   136   2e-30
emb|CAN73405.1| hypothetical protein VITISV_010053 [Vitis vinifera]   133   2e-29
gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]     132   2e-29

>dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/101 (63%), Positives = 80/101 (79%)
 Frame = +3

Query: 3    YQRLLGKLLYLSFTRPAITYAVGVLSQFMHKSRLPHLQATIHVLRYLKGCPGCGLLFRDN 182
            YQRL+GKL+YLS TRP I YAVGV+SQFMH  +  HL+A   ++RYLKG PG GLLF++N
Sbjct: 1365 YQRLVGKLIYLSHTRPDIAYAVGVVSQFMHSPQKHHLEAVFRIMRYLKGTPGRGLLFKNN 1424

Query: 183  GHSRVEAWTDVDYVGCRSDHRSTSGYCTTIGGNLITWRSKK 305
            GH  +EA+TD D+ G + D RSTSGY T +GGN++TWRSKK
Sbjct: 1425 GHLNIEAYTDADWAGSQIDRRSTSGYFTLVGGNVVTWRSKK 1465


>emb|CAN68477.1| hypothetical protein VITISV_029627 [Vitis vinifera]
          Length = 659

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/101 (63%), Positives = 77/101 (76%)
 Frame = +3

Query: 3   YQRLLGKLLYLSFTRPAITYAVGVLSQFMHKSRLPHLQATIHVLRYLKGCPGCGLLFRDN 182
           YQRL+G+L+YL+ TRP I Y+V V+SQFMH  R PHLQAT  VL YLKG PG G+LF+ N
Sbjct: 437 YQRLVGRLIYLAHTRPNIVYSVSVISQFMHDPREPHLQATYRVLHYLKGNPGKGILFKKN 496

Query: 183 GHSRVEAWTDVDYVGCRSDHRSTSGYCTTIGGNLITWRSKK 305
               +EA+TD DY G   D RST+GYCT +GGNL+TWRSKK
Sbjct: 497 NTVALEAYTDADYAGSLVDRRSTTGYCTFLGGNLVTWRSKK 537


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 2260

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/101 (61%), Positives = 76/101 (75%)
 Frame = +3

Query: 3    YQRLLGKLLYLSFTRPAITYAVGVLSQFMHKSRLPHLQATIHVLRYLKGCPGCGLLFRDN 182
            YQRL+GKL+YLS TRP I YAV V+SQFMH  R PH+ A   +LRYLK  PG GLLF ++
Sbjct: 1719 YQRLVGKLIYLSHTRPDIAYAVNVVSQFMHDPRKPHMDAVERILRYLKSAPGKGLLFSNH 1778

Query: 183  GHSRVEAWTDVDYVGCRSDHRSTSGYCTTIGGNLITWRSKK 305
            GH +VE +TD D+ G   D +ST+GY T +GGNL+TWRSKK
Sbjct: 1779 GHLKVEGYTDADWAGSADDRKSTAGYLTFVGGNLVTWRSKK 1819


>emb|CAN73405.1| hypothetical protein VITISV_010053 [Vitis vinifera]
          Length = 768

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/101 (61%), Positives = 75/101 (74%)
 Frame = +3

Query: 3   YQRLLGKLLYLSFTRPAITYAVGVLSQFMHKSRLPHLQATIHVLRYLKGCPGCGLLFRDN 182
           Y RL+G+L+YL+ TRP I Y+V V+SQFMH  R PHLQA   VL YLKG PG G+LF+ N
Sbjct: 546 YXRLVGRLIYLAHTRPDIAYSVSVISQFMHDPREPHLQAAYRVLHYLKGNPGKGILFKKN 605

Query: 183 GHSRVEAWTDVDYVGCRSDHRSTSGYCTTIGGNLITWRSKK 305
               +EA+TD DY G   D RST+GYCT +GGNL+TWRSKK
Sbjct: 606 NTLALEAYTDADYAGFLVDRRSTTGYCTFLGGNLVTWRSKK 646


>gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1299

 Score =  132 bits (333), Expect = 2e-29
 Identities = 57/101 (56%), Positives = 75/101 (74%)
 Frame = +3

Query: 3    YQRLLGKLLYLSFTRPAITYAVGVLSQFMHKSRLPHLQATIHVLRYLKGCPGCGLLFRDN 182
            YQRL+G+L+YL  TRP ITYAV ++S++MH  R  H++A   +LRYLKG PG GL F+ N
Sbjct: 1077 YQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSSHMEAVYRILRYLKGSPGKGLWFKKN 1136

Query: 183  GHSRVEAWTDVDYVGCRSDHRSTSGYCTTIGGNLITWRSKK 305
            GH ++E + D D+  C  D RSTSGYC  +GGNL++WRSKK
Sbjct: 1137 GHLKIEGYCDADWASCLDDRRSTSGYCVYVGGNLVSWRSKK 1177