BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035217
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi...   228   2e-57
emb|CBI31981.3| unnamed protein product [Vitis vinifera]              219   5e-55
gb|EEE68919.1| hypothetical protein OsJ_27783 [Oryza sativa Japo...   200   3e-49
gb|EEC83802.1| hypothetical protein OsI_29727 [Oryza sativa Indi...   200   3e-49
ref|XP_003559925.1| PREDICTED: pentatricopeptide repeat-containi...   192   8e-47

>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Vitis vinifera]
          Length = 597

 Score =  228 bits (580), Expect = 2e-57
 Identities = 116/172 (67%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   GCGVNGLAWEAIQLFERMQVMGVVPNEVTFLAVLNACSHGGLVREGKLYFEKMIRVYGFS 182
           G GV+G A  AI +F RM+V G  PNEVTFLAVLNACSHGG+V EG  + EKM+R YGFS
Sbjct: 405 GYGVHGQAKNAIMIFHRMEVEGYRPNEVTFLAVLNACSHGGMVVEGISFLEKMVREYGFS 464

Query: 183 PGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIERDTTAWRALLAACRVHGHVELGETARRT 362
           P + HYGCMIDLLGRAGLLEEA++LIKSLPIE D T WRALLAACRV+G+V+LGE  +R 
Sbjct: 465 PKVEHYGCMIDLLGRAGLLEEAHNLIKSLPIEGDATGWRALLAACRVYGNVDLGECVKRV 524

Query: 363 LMELNDEHPTDSILLSSSYAIHGRWDDITKIRE--EPGVRKEVGWSSIEMDN 512
           L+E+ DEHPTDSILLSS+YAI GR  D T+++E  E  + KE G S IEMD+
Sbjct: 525 LLEIFDEHPTDSILLSSTYAIAGRLPDYTRMQEIKEEKMMKEAGCSVIEMDS 576


>emb|CBI31981.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  219 bits (559), Expect = 5e-55
 Identities = 111/164 (67%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   GCGVNGLAWEAIQLFERMQVMGVVPNEVTFLAVLNACSHGGLVREGKLYFEKMIRVYGFS 182
           G GV+G A  AI +F RM+V G  PNEVTFLAVLNACSHGG+V EG  + EKM+R YGFS
Sbjct: 366 GYGVHGQAKNAIMIFHRMEVEGYRPNEVTFLAVLNACSHGGMVVEGISFLEKMVREYGFS 425

Query: 183 PGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIERDTTAWRALLAACRVHGHVELGETARRT 362
           P + HYGCMIDLLGRAGLLEEA++LIKSLPIE D T WRALLAACRV+G+V+LGE  +R 
Sbjct: 426 PKVEHYGCMIDLLGRAGLLEEAHNLIKSLPIEGDATGWRALLAACRVYGNVDLGECVKRV 485

Query: 363 LMELNDEHPTDSILLSSSYAIHGRWDDITKIRE--EPGVRKEVG 488
           L+E+ DEHPTDSILLSS+YAI GR  D T+++E  E  + KE G
Sbjct: 486 LLEIFDEHPTDSILLSSTYAIAGRLPDYTRMQEIKEEKMMKEAG 529


>gb|EEE68919.1| hypothetical protein OsJ_27783 [Oryza sativa Japonica Group]
          Length = 604

 Score =  200 bits (509), Expect = 3e-49
 Identities = 101/173 (58%), Positives = 122/173 (70%), Gaps = 5/173 (2%)
 Frame = +3

Query: 3   GCGVNGLAWEAIQLFERMQVMGVVPNEVTFLAVLNACSHGGLVREGKLYFEKMIRVYGFS 182
           G GVNG A E I LF  M+  GVVPNEVTFLAVLNACSHGGLV EGK + E M+  YG  
Sbjct: 388 GFGVNGQAGEVISLFRSMEEDGVVPNEVTFLAVLNACSHGGLVSEGKKFMESMVLQYGIF 447

Query: 183 PGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIERDTTAWRALLAACRVHGHVELGETARRT 362
           P   HYGC+IDLLGRAG L+EAY+LI SL  + D TAWRALLAACRVHG+  LG   +  
Sbjct: 448 PNTEHYGCIIDLLGRAGRLDEAYELIASLSSQSDATAWRALLAACRVHGNANLGRMVQAR 507

Query: 363 LMELNDEHPTDSILLSSSYAIHGRWDDITKIREEPGV-----RKEVGWSSIEM 506
           L  ++D HP+D+ILLS++YA+  RWD+I  +R+         +KE G SSIE+
Sbjct: 508 LDNMDDYHPSDAILLSNTYALESRWDEIAHVRDSEDQKIVKDKKEPGCSSIEV 560


>gb|EEC83802.1| hypothetical protein OsI_29727 [Oryza sativa Indica Group]
          Length = 605

 Score =  200 bits (509), Expect = 3e-49
 Identities = 101/173 (58%), Positives = 122/173 (70%), Gaps = 5/173 (2%)
 Frame = +3

Query: 3   GCGVNGLAWEAIQLFERMQVMGVVPNEVTFLAVLNACSHGGLVREGKLYFEKMIRVYGFS 182
           G GVNG A E I LF  M+  GVVPNEVTFLAVLNACSHGGLV EGK + E M+  YG  
Sbjct: 388 GFGVNGQAGEVISLFRSMEEDGVVPNEVTFLAVLNACSHGGLVSEGKKFMESMVLQYGIF 447

Query: 183 PGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIERDTTAWRALLAACRVHGHVELGETARRT 362
           P   HYGC+IDLLGRAG L+EAY+LI SL  + D TAWRALLAACRVHG+  LG   +  
Sbjct: 448 PNTEHYGCIIDLLGRAGRLDEAYELIASLSSQSDATAWRALLAACRVHGNANLGRMVQAR 507

Query: 363 LMELNDEHPTDSILLSSSYAIHGRWDDITKIREEPGV-----RKEVGWSSIEM 506
           L  ++D HP+D+ILLS++YA+  RWD+I  +R+         +KE G SSIE+
Sbjct: 508 LDNMDDYHPSDAILLSNTYALESRWDEIAHVRDSEDQKIVKDKKEPGCSSIEV 560


>ref|XP_003559925.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Brachypodium distachyon]
          Length = 560

 Score =  192 bits (488), Expect = 8e-47
 Identities = 98/172 (56%), Positives = 119/172 (69%), Gaps = 4/172 (2%)
 Frame = +3

Query: 3   GCGVNGLAWEAIQLFERMQVMGVVPNEVTFLAVLNACSHGGLVREGKLYFEKMIRVYGFS 182
           G GVNG +  A+  F  M   GV PNEVTFLAVLNACSHGGLV EGK + E M+R YG S
Sbjct: 387 GLGVNGQSDAALSQFRAMARDGVAPNEVTFLAVLNACSHGGLVSEGKKHLESMVRQYGIS 446

Query: 183 PGIAHYGCMIDLLGRAGLLEEAYDLIKSLPIERDTTAWRALLAACRVHGHVELGETARRT 362
           P   HYGC+IDLLGRAG LEEAYDL+++L    D  AWRALLAACRVHG++ELG   +  
Sbjct: 447 PRSEHYGCIIDLLGRAGRLEEAYDLMRNLSSHGDAMAWRALLAACRVHGNIELGRMVQAQ 506

Query: 363 LMELNDEHPTDSILLSSSYAIHGRWDDITKIREEPG----VRKEVGWSSIEM 506
           L  + D HP+D+ILLS+ YA   RWD+I  +R+        +K+ G SSIE+
Sbjct: 507 LDAMGDYHPSDTILLSNVYASEDRWDEIAHVRDSGQKLVMYKKQAGCSSIEV 558