BLASTX nr result

ID: Coptis25_contig00035211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035211
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24760.3| unnamed protein product [Vitis vinifera]              209   1e-52
ref|XP_002533351.1| conserved hypothetical protein [Ricinus comm...   207   6e-52
emb|CAN75811.1| hypothetical protein VITISV_004632 [Vitis vinifera]   200   1e-49
ref|XP_002310377.1| predicted protein [Populus trichocarpa] gi|2...   188   5e-46

>emb|CBI24760.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  209 bits (533), Expect = 1e-52
 Identities = 95/126 (75%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   YYGWKSTSGSASGYHRFSNYMDKCSGGQSYLSVDQHGIVAXXXXXXXXXXAQADWKSYNP 182
           Y+GWKSTSGSASG+HRFSNYMDKCSGGQSYL+ D+HG V+          A+ADWKS NP
Sbjct: 91  YFGWKSTSGSASGHHRFSNYMDKCSGGQSYLTADKHGKVSLRSLSSLKSLAEADWKSINP 150

Query: 183 PKNLNHREFRFWVSRSTGKCLTVFGGKTKKQ-VGVSDCKFKGSNPYQLFAFRFHYHKAFC 359
           PK LNHRE RFWV   TGKCLTVFGGKTKK+ VGV+ CKF GSNPYQLFAFRFHYHKAFC
Sbjct: 151 PKELNHRELRFWVHLGTGKCLTVFGGKTKKRTVGVAKCKFDGSNPYQLFAFRFHYHKAFC 210

Query: 360 CCGRYN 377
           CCG +N
Sbjct: 211 CCGVHN 216


>ref|XP_002533351.1| conserved hypothetical protein [Ricinus communis]
           gi|223526816|gb|EEF29036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  207 bits (528), Expect = 6e-52
 Identities = 95/128 (74%), Positives = 104/128 (81%), Gaps = 3/128 (2%)
 Frame = +3

Query: 3   YYGWKSTSGSASGYHRFSNYMDKCSGGQSYLSVDQHGIVAXXXXXXXXXXAQADWKSYNP 182
           Y+GW+STSGSASGYHRF NYMDKCS G SYL+VD+HG V+          A+ADWKS NP
Sbjct: 98  YFGWESTSGSASGYHRFRNYMDKCSKGGSYLTVDKHGKVSLRSLGSLESLAEADWKSVNP 157

Query: 183 PKNLNHREFRFWVSRSTGKCLTVFGGKTKK---QVGVSDCKFKGSNPYQLFAFRFHYHKA 353
           PK LNHREFRFWVS STGKCLTVFGGKTKK    VGV++CKF GSNP+QLFAFRFHYHKA
Sbjct: 158 PKKLNHREFRFWVSHSTGKCLTVFGGKTKKDKRSVGVAECKFDGSNPFQLFAFRFHYHKA 217

Query: 354 FCCCGRYN 377
           FCCCG  N
Sbjct: 218 FCCCGLSN 225


>emb|CAN75811.1| hypothetical protein VITISV_004632 [Vitis vinifera]
          Length = 231

 Score =  200 bits (508), Expect = 1e-49
 Identities = 95/140 (67%), Positives = 104/140 (74%), Gaps = 15/140 (10%)
 Frame = +3

Query: 3   YYGWKSTSGSASGYHR--------------FSNYMDKCSGGQSYLSVDQHGIVAXXXXXX 140
           Y+GWKSTSGSASG+HR              FSNYMDKCSGGQSYL+ D+HG V+      
Sbjct: 91  YFGWKSTSGSASGHHRQDLTHRDYPIMVHRFSNYMDKCSGGQSYLTADKHGKVSLRSLSS 150

Query: 141 XXXXAQADWKSYNPPKNLNHREFRFWVSRSTGKCLTVFGGKTKKQ-VGVSDCKFKGSNPY 317
               A+ADWKS NPPK LNHRE RFWV   TGKCLTVFGGKTKK+ VGV+ CKF GSNPY
Sbjct: 151 LKSLAEADWKSINPPKELNHRELRFWVHLGTGKCLTVFGGKTKKRTVGVAKCKFDGSNPY 210

Query: 318 QLFAFRFHYHKAFCCCGRYN 377
           QLFAFRFHYHKAFCCCG +N
Sbjct: 211 QLFAFRFHYHKAFCCCGVHN 230


>ref|XP_002310377.1| predicted protein [Populus trichocarpa] gi|222853280|gb|EEE90827.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  188 bits (477), Expect = 5e-46
 Identities = 86/126 (68%), Positives = 98/126 (77%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   YYGWKSTSGSASGYHRFSNYMDKCSGGQSYLSVDQHGIVAXXXXXXXXXXAQADWKSYNP 182
           Y+GW+STSGS SG+HRF NYMD+CSGGQSYL+VD+ G V+           +ADWKS NP
Sbjct: 90  YFGWESTSGSGSGFHRFRNYMDRCSGGQSYLTVDKKGKVSLRSLKSLQSLGEADWKSINP 149

Query: 183 PKNLNHREFRFWVSRSTGKCLTVF-GGKTKKQVGVSDCKFKGSNPYQLFAFRFHYHKAFC 359
           PK LNHREFRFWV+R TGKCLTVF   K K+ VGVS+CK  GSN YQLFAFRFHYHKAFC
Sbjct: 150 PKRLNHREFRFWVNRITGKCLTVFEEKKDKRTVGVSECKLDGSNTYQLFAFRFHYHKAFC 209

Query: 360 CCGRYN 377
            CG +N
Sbjct: 210 SCGVHN 215


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