BLASTX nr result

ID: Coptis25_contig00035209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035209
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241...   235   3e-60
emb|CBI18109.3| unnamed protein product [Vitis vinifera]              235   3e-60
ref|XP_004156673.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   228   5e-58
ref|XP_004137896.1| PREDICTED: uncharacterized protein LOC101215...   228   5e-58
ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...   227   8e-58

>ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera]
          Length = 1126

 Score =  235 bits (600), Expect = 3e-60
 Identities = 119/184 (64%), Positives = 139/184 (75%)
 Frame = +2

Query: 2    TNKDSKKKGRAKEGLITIWNPTEKQQHELVEGQAYIIGGLMPPNFDSETVYLHARGSTTS 181
            T K  + K   KEGLITIWNPTEKQQ ELVEGQAY + GLMP N DSET+YL ARGSTT 
Sbjct: 878  TCKSYEGKIHHKEGLITIWNPTEKQQFELVEGQAYAVAGLMPLNSDSETLYLQARGSTTK 937

Query: 182  WQTLSPLAIASFEPFFSARRLVFLSNMDELPQASEFDTAAVVVHVGEVYTCGHQKRQWVF 361
            W  LSPLAI  FEPF + R+ V LSN+ E+P +SEFD AA+VV+VGEVYT  HQK+QWVF
Sbjct: 938  WNPLSPLAIEHFEPFLNPRKSVLLSNLGEIPLSSEFDIAALVVYVGEVYTAAHQKKQWVF 997

Query: 362  VTDGSTPVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFCNMIKREPDRMNH 541
            VTDGS     S+E+ N LLAISFC+P+ D+ S  P+N  L GST+GF N+IKR  D+MN 
Sbjct: 998  VTDGSVSELGSEEASNCLLAISFCSPSVDD-SFAPVNSNLEGSTVGFVNLIKRAKDQMNQ 1056

Query: 542  LWVA 553
            LWVA
Sbjct: 1057 LWVA 1060


>emb|CBI18109.3| unnamed protein product [Vitis vinifera]
          Length = 1134

 Score =  235 bits (600), Expect = 3e-60
 Identities = 119/184 (64%), Positives = 139/184 (75%)
 Frame = +2

Query: 2    TNKDSKKKGRAKEGLITIWNPTEKQQHELVEGQAYIIGGLMPPNFDSETVYLHARGSTTS 181
            T K  + K   KEGLITIWNPTEKQQ ELVEGQAY + GLMP N DSET+YL ARGSTT 
Sbjct: 898  TCKSYEGKIHHKEGLITIWNPTEKQQFELVEGQAYAVAGLMPLNSDSETLYLQARGSTTK 957

Query: 182  WQTLSPLAIASFEPFFSARRLVFLSNMDELPQASEFDTAAVVVHVGEVYTCGHQKRQWVF 361
            W  LSPLAI  FEPF + R+ V LSN+ E+P +SEFD AA+VV+VGEVYT  HQK+QWVF
Sbjct: 958  WNPLSPLAIEHFEPFLNPRKSVLLSNLGEIPLSSEFDIAALVVYVGEVYTAAHQKKQWVF 1017

Query: 362  VTDGSTPVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFCNMIKREPDRMNH 541
            VTDGS     S+E+ N LLAISFC+P+ D+ S  P+N  L GST+GF N+IKR  D+MN 
Sbjct: 1018 VTDGSVSELGSEEASNCLLAISFCSPSVDD-SFAPVNSNLEGSTVGFVNLIKRAKDQMNQ 1076

Query: 542  LWVA 553
            LWVA
Sbjct: 1077 LWVA 1080


>ref|XP_004156673.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230245
            [Cucumis sativus]
          Length = 1111

 Score =  228 bits (581), Expect = 5e-58
 Identities = 108/184 (58%), Positives = 137/184 (74%)
 Frame = +2

Query: 2    TNKDSKKKGRAKEGLITIWNPTEKQQHELVEGQAYIIGGLMPPNFDSETVYLHARGSTTS 181
            T+K S++K   KEGLITIWNP+EKQQ ELVEGQAY IGGL+P N D++ +YL  +GSTT 
Sbjct: 874  TSKSSQRKTHGKEGLITIWNPSEKQQLELVEGQAYAIGGLVPINCDADILYLQTKGSTTK 933

Query: 182  WQTLSPLAIASFEPFFSARRLVFLSNMDELPQASEFDTAAVVVHVGEVYTCGHQKRQWVF 361
            WQ+LSP ++  FEPF+  R+ V LSN+ E+P +SEFD  A++VHVGEV+    QK+QW+F
Sbjct: 934  WQSLSPQSMKCFEPFYKPRKSVLLSNLGEVPLSSEFDVVAIIVHVGEVFATAQQKKQWIF 993

Query: 362  VTDGSTPVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFCNMIKREPDRMNH 541
            V DG    S S+   NSLLAISFC+   D+ S VP+N  L GST GFCN+IKR  D++NH
Sbjct: 994  VVDGFVSESHSEGISNSLLAISFCSQYADDDSFVPMNSNLTGSTAGFCNLIKRPKDQINH 1053

Query: 542  LWVA 553
            LWVA
Sbjct: 1054 LWVA 1057


>ref|XP_004137896.1| PREDICTED: uncharacterized protein LOC101215906 [Cucumis sativus]
          Length = 1111

 Score =  228 bits (581), Expect = 5e-58
 Identities = 108/184 (58%), Positives = 137/184 (74%)
 Frame = +2

Query: 2    TNKDSKKKGRAKEGLITIWNPTEKQQHELVEGQAYIIGGLMPPNFDSETVYLHARGSTTS 181
            T+K S++K   KEGLITIWNP+EKQQ ELVEGQAY IGGL+P N D++ +YL  +GSTT 
Sbjct: 874  TSKSSQRKTHGKEGLITIWNPSEKQQLELVEGQAYAIGGLVPINCDADILYLQTKGSTTK 933

Query: 182  WQTLSPLAIASFEPFFSARRLVFLSNMDELPQASEFDTAAVVVHVGEVYTCGHQKRQWVF 361
            WQ+LSP ++  FEPF+  R+ V LSN+ E+P +SEFD  A++VHVGEV+    QK+QW+F
Sbjct: 934  WQSLSPQSMKCFEPFYKPRKSVLLSNLGEVPLSSEFDVVAIIVHVGEVFATAQQKKQWIF 993

Query: 362  VTDGSTPVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFCNMIKREPDRMNH 541
            V DG    S S+   NSLLAISFC+   D+ S VP+N  L GST GFCN+IKR  D++NH
Sbjct: 994  VVDGFVSESHSEGISNSLLAISFCSQYADDDSFVPMNSNLTGSTAGFCNLIKRPKDQINH 1053

Query: 542  LWVA 553
            LWVA
Sbjct: 1054 LWVA 1057


>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus
            communis] gi|223533978|gb|EEF35700.1| breast cancer type
            2 susceptibility protein brca2, putative [Ricinus
            communis]
          Length = 1156

 Score =  227 bits (579), Expect = 8e-58
 Identities = 112/181 (61%), Positives = 136/181 (75%)
 Frame = +2

Query: 11   DSKKKGRAKEGLITIWNPTEKQQHELVEGQAYIIGGLMPPNFDSETVYLHARGSTTSWQT 190
            +++ KG  KEGLITIWNPTEKQ+ ELVEGQAY + GL+P N DS T+YL ARGS T W +
Sbjct: 888  NNQGKGILKEGLITIWNPTEKQKTELVEGQAYAVAGLLPVNSDSNTLYLQARGSATKWLS 947

Query: 191  LSPLAIASFEPFFSARRLVFLSNMDELPQASEFDTAAVVVHVGEVYTCGHQKRQWVFVTD 370
            LS LAI  F+PFFS R  V LSN+ E+P +SEFDTAA VV+VGEVYT    K+QWVFV D
Sbjct: 948  LSSLAIQHFQPFFSPRESVSLSNLGEVPLSSEFDTAAYVVYVGEVYTTAQWKKQWVFVID 1007

Query: 371  GSTPVSESKESPNSLLAISFCTPTFDNGSSVPINYALAGSTIGFCNMIKREPDRMNHLWV 550
             S    +S+E  NSLLAISFCTP  ++GS  PIN  LAG+T+GF N+IK+  D+MNH+W 
Sbjct: 1008 NSISTLKSEEISNSLLAISFCTPCINDGSFAPINSNLAGTTVGFFNLIKKAEDQMNHVWT 1067

Query: 551  A 553
            A
Sbjct: 1068 A 1068


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