BLASTX nr result

ID: Coptis25_contig00035202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035202
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276737.1| PREDICTED: early nodulin-like protein 1-like...   165   1e-38
emb|CBI38810.3| unnamed protein product [Vitis vinifera]              163   5e-38
ref|XP_002339794.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37
ref|XP_002511749.1| copper ion binding protein, putative [Ricinu...   160   3e-37
ref|XP_004144997.1| PREDICTED: blue copper protein-like [Cucumis...   157   3e-36

>ref|XP_002276737.1| PREDICTED: early nodulin-like protein 1-like [Vitis vinifera]
          Length = 205

 Score =  165 bits (417), Expect = 1e-38
 Identities = 83/143 (58%), Positives = 100/143 (69%), Gaps = 5/143 (3%)
 Frame = +3

Query: 198 NLLVISLLITCVASQ----SYTNHTVGDSAGWLFXXXXXXXXANYSKWASTQVFNLGDFL 365
           N+ V++LLI   AS     SYTNHTVG  AGW F         +YSKWA+ Q F+LGDFL
Sbjct: 3   NVTVMALLIAIAASATPAASYTNHTVGGDAGWFFNTTTNTSIIDYSKWAANQTFSLGDFL 62

Query: 366 IFKTTTNQTVIQTYNQTTYKACDSADALDTDTFVY-SGGNEINVPLTLAVALTSEVTNYF 542
           IFKT TNQTV+QTYN+TTY++C++ DA D DTF Y +G NE     T+AVALT E  NY+
Sbjct: 63  IFKTNTNQTVVQTYNETTYQSCNTDDASDDDTFHYDAGSNEFGEAWTIAVALTIEGPNYY 122

Query: 543 FSDADDGVQCAQGMAFEISVKHG 611
            SDADDGVQC  G++F I VKHG
Sbjct: 123 LSDADDGVQCQNGLSFAIDVKHG 145


>emb|CBI38810.3| unnamed protein product [Vitis vinifera]
          Length = 199

 Score =  163 bits (412), Expect = 5e-38
 Identities = 78/137 (56%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
 Frame = +3

Query: 204 LVISLLITCVASQSYTNHTVGDSAGWLFXXXXXXXXANYSKWASTQVFNLGDFLIFKTTT 383
           L+I++  +   + SYTNHTVG  AGW F         +YSKWA+ Q F+LGDFLIFKT T
Sbjct: 3   LLIAIAASATPAASYTNHTVGGDAGWFFNTTTNTSIIDYSKWAANQTFSLGDFLIFKTNT 62

Query: 384 NQTVIQTYNQTTYKACDSADALDTDTFVY-SGGNEINVPLTLAVALTSEVTNYFFSDADD 560
           NQTV+QTYN+TTY++C++ DA D DTF Y +G NE     T+AVALT E  NY+ SDADD
Sbjct: 63  NQTVVQTYNETTYQSCNTDDASDDDTFHYDAGSNEFGEAWTIAVALTIEGPNYYLSDADD 122

Query: 561 GVQCAQGMAFEISVKHG 611
           GVQC  G++F I VKHG
Sbjct: 123 GVQCQNGLSFAIDVKHG 139


>ref|XP_002339794.1| predicted protein [Populus trichocarpa] gi|222832256|gb|EEE70733.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  162 bits (409), Expect = 1e-37
 Identities = 81/150 (54%), Positives = 104/150 (69%), Gaps = 5/150 (3%)
 Frame = +3

Query: 177 MRSARTANLLVISLLITCVASQS----YTNHTVGDSAGWLFXXXXXXXXANYSKWASTQV 344
           MR A   +L +I++LIT   SQ+    Y NHTVGD+AGW F        ANYS WA++Q 
Sbjct: 1   MRLATILHLAIIAVLITAATSQAPPIRYINHTVGDNAGWFFNSTTNTTAANYSSWAASQT 60

Query: 345 FNLGDFLIFKTTTNQTVIQTYNQTTYKACDSADALDTDTFVYSGGNEI-NVPLTLAVALT 521
           FNLGD+LIF+T++NQTVIQTYN TT+K C    + D DT VY+GGN + +  LT+ V LT
Sbjct: 61  FNLGDYLIFRTSSNQTVIQTYNLTTFKDCSIDHSSDNDTVVYNGGNTVFDQALTIPVPLT 120

Query: 522 SEVTNYFFSDADDGVQCAQGMAFEISVKHG 611
            +  NYFFSDA+DG+QC  G+AFEI+V  G
Sbjct: 121 IQGPNYFFSDANDGIQCQYGLAFEINVNRG 150


>ref|XP_002511749.1| copper ion binding protein, putative [Ricinus communis]
           gi|223548929|gb|EEF50418.1| copper ion binding protein,
           putative [Ricinus communis]
          Length = 213

 Score =  160 bits (405), Expect = 3e-37
 Identities = 81/150 (54%), Positives = 96/150 (64%), Gaps = 5/150 (3%)
 Frame = +3

Query: 177 MRSARTANLLVISLLITCVASQS----YTNHTVGDSAGWLFXXXXXXXXANYSKWASTQV 344
           MR A    L   + +IT  ASQ+    YTNHTVG+ AGW F         NYS WA++Q 
Sbjct: 1   MRVATLVQLTFTAFMITAAASQTPSTVYTNHTVGEKAGWFFNSTASTPAVNYSSWAASQT 60

Query: 345 FNLGDFLIFKTTTNQTVIQTYNQTTYKACDSADALDTDTFVYSGGN-EINVPLTLAVALT 521
           FNLGDFLIF T TNQTVIQTYN+TT++ C   ++LD DT  Y GGN    + LT++V LT
Sbjct: 61  FNLGDFLIFNTNTNQTVIQTYNETTFRNCTIDESLDNDTIQYDGGNTAFGIALTISVPLT 120

Query: 522 SEVTNYFFSDADDGVQCAQGMAFEISVKHG 611
            E  NYFFSD +DG QC  GMAFEI V  G
Sbjct: 121 IEGPNYFFSDGEDGNQCLHGMAFEIQVNRG 150


>ref|XP_004144997.1| PREDICTED: blue copper protein-like [Cucumis sativus]
           gi|449473465|ref|XP_004153889.1| PREDICTED: blue copper
           protein-like [Cucumis sativus]
           gi|449498902|ref|XP_004160666.1| PREDICTED: blue copper
           protein-like [Cucumis sativus]
          Length = 216

 Score =  157 bits (397), Expect = 3e-36
 Identities = 81/140 (57%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
 Frame = +3

Query: 207 VISLLITCVASQS----YTNHTVGDSAGWLFXXXXXXXXANYSKWASTQVFNLGDFLIFK 374
           + +LLIT VASQ+    YTN+TVG  AGW F         NYS WA++Q FNLGDFLIF+
Sbjct: 11  LFALLITAVASQTPPTAYTNYTVGGPAGWFFNATNNISTTNYSSWAASQTFNLGDFLIFR 70

Query: 375 TTTNQTVIQTYNQTTYKACDSADALDTDTFVYSGG-NEINVPLTLAVALTSEVTNYFFSD 551
           T +NQTVIQTYN TT+ +C   DA D DT  Y GG +  N PL + V LT +  NYFFSD
Sbjct: 71  TNSNQTVIQTYNLTTFNSCSFDDASDNDTVQYYGGDSNFNKPLVIPVPLTIKGPNYFFSD 130

Query: 552 ADDGVQCAQGMAFEISVKHG 611
           ADDGVQC +GMAFEI V  G
Sbjct: 131 ADDGVQCQRGMAFEIEVNTG 150


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