BLASTX nr result
ID: Coptis25_contig00035193
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035193 (246 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa] 150 1e-34 dbj|BAG30707.1| decrease in DNA methylation 1 [Brassica rapa] 149 2e-34 gb|AAP92713.1| Swi2/Snf2-related protein DDM1 [Arabidopsis arenosa] 149 2e-34 gb|AAX22755.1| SWI2/SNF2-like protein [Arabidopsis thaliana] 148 4e-34 gb|AAX22754.1| SWI2/SNF2-like protein [Arabidopsis thaliana] 148 4e-34 >dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa] Length = 766 Score = 150 bits (379), Expect = 1e-34 Identities = 68/81 (83%), Positives = 75/81 (92%) Frame = -3 Query: 244 STLSNWVNEIERFTPSINAIVYHGDKKARDELRRKYMPRNAGPEFPIVITSYEVAMNDAR 65 STLSNW+NEI RFTPSINAI+YHGDKK RDELRRK+MP+ GP+FPIVITSYEVAMNDAR Sbjct: 258 STLSNWMNEIARFTPSINAIIYHGDKKKRDELRRKHMPKTVGPKFPIVITSYEVAMNDAR 317 Query: 64 RCLRHYQWKYVVVDEGHRLKN 2 + LRHY WKYVV+DEGHRLKN Sbjct: 318 KNLRHYPWKYVVIDEGHRLKN 338 >dbj|BAG30707.1| decrease in DNA methylation 1 [Brassica rapa] Length = 767 Score = 149 bits (377), Expect = 2e-34 Identities = 67/81 (82%), Positives = 75/81 (92%) Frame = -3 Query: 244 STLSNWVNEIERFTPSINAIVYHGDKKARDELRRKYMPRNAGPEFPIVITSYEVAMNDAR 65 STLSNW+NEI RFTPSINAI+YHGDKK RDELR+K+MPR GP+FPIVITSYEVAMNDA+ Sbjct: 262 STLSNWMNEISRFTPSINAIIYHGDKKERDELRKKHMPRTVGPKFPIVITSYEVAMNDAK 321 Query: 64 RCLRHYQWKYVVVDEGHRLKN 2 + LRHY WKYVV+DEGHRLKN Sbjct: 322 KNLRHYPWKYVVIDEGHRLKN 342 >gb|AAP92713.1| Swi2/Snf2-related protein DDM1 [Arabidopsis arenosa] Length = 764 Score = 149 bits (377), Expect = 2e-34 Identities = 68/81 (83%), Positives = 74/81 (91%) Frame = -3 Query: 244 STLSNWVNEIERFTPSINAIVYHGDKKARDELRRKYMPRNAGPEFPIVITSYEVAMNDAR 65 STLSNW NEI RFTPSINAI+YHGDKK RDELRRK+MP+ GP+FPIVITSYEVAMNDA+ Sbjct: 260 STLSNWFNEIARFTPSINAIIYHGDKKQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAK 319 Query: 64 RCLRHYQWKYVVVDEGHRLKN 2 R LRHY WKYVV+DEGHRLKN Sbjct: 320 RNLRHYPWKYVVIDEGHRLKN 340 >gb|AAX22755.1| SWI2/SNF2-like protein [Arabidopsis thaliana] Length = 698 Score = 148 bits (374), Expect = 4e-34 Identities = 67/81 (82%), Positives = 73/81 (90%) Frame = -3 Query: 244 STLSNWVNEIERFTPSINAIVYHGDKKARDELRRKYMPRNAGPEFPIVITSYEVAMNDAR 65 STLSNW NEI RFTPSINAI+YHGDK RDELRRK+MP+ GP+FPIVITSYEVAMNDA+ Sbjct: 217 STLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAK 276 Query: 64 RCLRHYQWKYVVVDEGHRLKN 2 R LRHY WKYVV+DEGHRLKN Sbjct: 277 RILRHYPWKYVVIDEGHRLKN 297 >gb|AAX22754.1| SWI2/SNF2-like protein [Arabidopsis thaliana] Length = 705 Score = 148 bits (374), Expect = 4e-34 Identities = 67/81 (82%), Positives = 73/81 (90%) Frame = -3 Query: 244 STLSNWVNEIERFTPSINAIVYHGDKKARDELRRKYMPRNAGPEFPIVITSYEVAMNDAR 65 STLSNW NEI RFTPSINAI+YHGDK RDELRRK+MP+ GP+FPIVITSYEVAMNDA+ Sbjct: 217 STLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAK 276 Query: 64 RCLRHYQWKYVVVDEGHRLKN 2 R LRHY WKYVV+DEGHRLKN Sbjct: 277 RILRHYPWKYVVIDEGHRLKN 297