BLASTX nr result

ID: Coptis25_contig00035192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035192
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314493.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
gb|ABG37642.1| cyclopropane fatty acid synthase [Populus trichoc...   159   2e-37
ref|XP_002311690.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36
ref|XP_002281923.2| PREDICTED: uncharacterized protein LOC100242...   155   3e-36
ref|XP_002281958.1| PREDICTED: uncharacterized protein LOC100249...   152   4e-35

>ref|XP_002314493.1| predicted protein [Populus trichocarpa] gi|222863533|gb|EEF00664.1|
           predicted protein [Populus trichocarpa]
          Length = 866

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/108 (69%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = -2

Query: 322 GIK-GMVAAHSVLGKSCVLLGNRKHMLPSVTEKGARIFVTKFLERFITTGHLTLLEDGGT 146
           G+K GMVAAH +LGKSC +L N KHM+PS+ E GAR+FVT+FL   I+TG LTLLEDGGT
Sbjct: 406 GLKSGMVAAHGLLGKSCDILRNPKHMVPSMLETGARLFVTRFLGHHISTGCLTLLEDGGT 465

Query: 145 IFSFQGDNMKCRLEAVLRVHNPQFYWKVATHADLGIADAYVNGDFSFV 2
           +FSF+G + KC L+ VL+VHNPQFYWK+ T ADLG+ADAY+NGDFSFV
Sbjct: 466 VFSFEGTSKKCSLKTVLKVHNPQFYWKIMTQADLGLADAYINGDFSFV 513


>gb|ABG37642.1| cyclopropane fatty acid synthase [Populus trichocarpa]
          Length = 1664

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/108 (69%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = -2

Query: 322 GIK-GMVAAHSVLGKSCVLLGNRKHMLPSVTEKGARIFVTKFLERFITTGHLTLLEDGGT 146
           G+K GMVAAH +LGKSC +L N KHM+PS+ E GAR+FVT+FL   I+TG LTLLEDGGT
Sbjct: 343 GLKSGMVAAHGLLGKSCDILRNPKHMVPSMLETGARLFVTRFLGHHISTGCLTLLEDGGT 402

Query: 145 IFSFQGDNMKCRLEAVLRVHNPQFYWKVATHADLGIADAYVNGDFSFV 2
           +FSF+G + KC L+ VL+VHNPQFYWK+ T ADLG+ADAY+NGDFSFV
Sbjct: 403 VFSFEGTSKKCSLKTVLKVHNPQFYWKIMTQADLGLADAYINGDFSFV 450



 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/105 (56%), Positives = 75/105 (71%)
 Frame = -2

Query: 319  IKGMVAAHSVLGKSCVLLGNRKHMLPSVTEKGARIFVTKFLERFITTGHLTLLEDGGTIF 140
            +  M AA+   G++C  L + K M PS  E  AR+FVTKFL R I+T  L L E+GG  F
Sbjct: 873  VASMAAANCSSGETCAALIHGKQMAPSRLEAWARLFVTKFLGRHISTHRLILEEEGGATF 932

Query: 139  SFQGDNMKCRLEAVLRVHNPQFYWKVATHADLGIADAYVNGDFSF 5
            +F+G + KC LE VL+VHNPQFYWKV T AD+G+ADAY++GDFSF
Sbjct: 933  TFEGTSKKCSLEVVLKVHNPQFYWKVTTRADIGLADAYIDGDFSF 977


>ref|XP_002311690.1| predicted protein [Populus trichocarpa] gi|222851510|gb|EEE89057.1|
           predicted protein [Populus trichocarpa]
          Length = 862

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = -2

Query: 322 GIK-GMVAAHSVLGKSCVLLGNRKHMLPSVTEKGARIFVTKFLERFITTGHLTLLEDGGT 146
           G+K GMVAAH +LG SC +L N KHM PS+ E GAR+FVT+FL  +I+TG L LLE+GGT
Sbjct: 402 GLKSGMVAAHGLLGNSCAILSNPKHMAPSMLETGARLFVTRFLGHYISTGCLILLEEGGT 461

Query: 145 IFSFQGDNMKCRLEAVLRVHNPQFYWKVATHADLGIADAYVNGDFSFV 2
           +FSF+G + KC L+ VL+VHNPQFYWK+ T ADLG+ADAY+NGDFSFV
Sbjct: 462 VFSFEGTSKKCSLKTVLKVHNPQFYWKIMTQADLGLADAYINGDFSFV 509


>ref|XP_002281923.2| PREDICTED: uncharacterized protein LOC100242555 [Vitis vinifera]
          Length = 865

 Score =  155 bits (392), Expect = 3e-36
 Identities = 71/108 (65%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = -2

Query: 322 GIK-GMVAAHSVLGKSCVLLGNRKHMLPSVTEKGARIFVTKFLERFITTGHLTLLEDGGT 146
           G+K GMVAAHS+LGK C +L N KHM+PS+ E GAR+FVT+FL  +I+TG L LLE+GGT
Sbjct: 405 GLKAGMVAAHSILGKGCAVLNNPKHMVPSLLETGARLFVTRFLGHYISTGCLILLEEGGT 464

Query: 145 IFSFQGDNMKCRLEAVLRVHNPQFYWKVATHADLGIADAYVNGDFSFV 2
           I++F+G   KC L+  L++HNPQFYWKVAT ADLG+ADAY+NGDFS V
Sbjct: 465 IYTFEGSGKKCLLKVALKIHNPQFYWKVATQADLGLADAYINGDFSLV 512


>ref|XP_002281958.1| PREDICTED: uncharacterized protein LOC100249441 [Vitis vinifera]
          Length = 865

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/108 (63%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
 Frame = -2

Query: 322 GIK-GMVAAHSVLGKSCVLLGNRKHMLPSVTEKGARIFVTKFLERFITTGHLTLLEDGGT 146
           G+K GMVAAH +LGK C +L N KHM+PS+ E GAR+FVT+FL  +I+TG L LLE+GGT
Sbjct: 405 GLKAGMVAAHGMLGKGCAVLNNPKHMVPSLLETGARLFVTRFLGHYISTGCLILLEEGGT 464

Query: 145 IFSFQGDNMKCRLEAVLRVHNPQFYWKVATHADLGIADAYVNGDFSFV 2
           I++F+G   KC L+  L++HNPQFYWK+AT ADLG+ADAY+NGDFS V
Sbjct: 465 IYTFEGSRKKCLLKVSLKIHNPQFYWKIATQADLGLADAYINGDFSLV 512


Top