BLASTX nr result

ID: Coptis25_contig00035189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035189
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = -1

Query: 359 LRNKIDTAPVWIKMTNVPKELWTLNG*SFLASLVGGPKCMDEATTLKKRLDFAKVCVEIP 180
           L++ +   PVW+++ NVP E WT+ G S +AS VG P   D  T L+KRL +A+VCVEI 
Sbjct: 233 LKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEID 292

Query: 179 LLYHYPSSIGVKV-GER*LTIGVEYPWKPSSCANCMRFGHNTNKCQT 42
                     ++      +TI  EY W PS C+NC  FGH T  C T
Sbjct: 293 ASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCAT 339


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = -1

Query: 359 LRNKIDTAPVWIKMTNVPKELWTLNG*SFLASLVGGPKCMDEATTLKKRLDFAKVCVEIP 180
           L++ +   PVW+++ NVP E WT+ G S +AS VG P   D  T L+KRL +A+VCVEI 
Sbjct: 233 LKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEID 292

Query: 179 LLYHYPSSIGVKV-GER*LTIGVEYPWKPSSCANCMRFGHNTNKCQT 42
                     ++      +TI  EY W PS C+NC  FGH T  C T
Sbjct: 293 ASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCAT 339



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = -1

Query: 359  LRNKIDTAPVWIKMTNVPKELWTLNG*SFLASLVGGPKCMDEATTLKKRLDFAKVCVEIP 180
            L++ +   PVW+++ NVP E WT+ G S +AS VG P   D  T L+KRL +A+VCVEI 
Sbjct: 1026 LKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEID 1085

Query: 179  LLYHYPSSIGVKV-GER*LTIGVEYPWKPSSCANCMRFGHNTNKCQT 42
                      ++      +TI  EY W PS C+NC  FGH T  C T
Sbjct: 1086 ASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCAT 1132


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = -1

Query: 359 LRNKIDTAPVWIKMTNVPKELWTLNG*SFLASLVGGPKCMDEATTLKKRLDFAKVCVEIP 180
           L++     PVW+++ NVP E WT+ G S +AS +G P   D  T L+KRL +A+VCVEI 
Sbjct: 233 LKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEID 292

Query: 179 LLYHYPSSIGVKV-GER*LTIGVEYPWKPSSCANCMRFGHNTNKCQT 42
                     ++      +TI  EY W PS C+NC  FGH T  C T
Sbjct: 293 ASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCAT 339


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = -1

Query: 359 LRNKIDTAPVWIKMTNVPKELWTLNG*SFLASLVGGPKCMDEATTLKKRLDFAKVCVEIP 180
           L++ +   PVW+ + NVP E WT+ G S +AS +G P   D  T L+KRL +A+VCVEI 
Sbjct: 233 LKDDLARVPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEID 292

Query: 179 LLYHYPSSIGVKV-GER*LTIGVEYPWKPSSCANCMRFGHNTNKCQT 42
                     ++      +TI  EY W PS C+NC  FGH    C T
Sbjct: 293 ASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTRTLCAT 339


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = -1

Query: 359 LRNKIDTAPVWIKMTNVPKELWTLNG*SFLASLVGGPKCMDEATTLKKRLDFAKVCVEIP 180
           L++ +   PVW+++ NVP E WT+ G S +AS +G P   D  T L+KRL + +VCVEI 
Sbjct: 86  LKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYVRVCVEID 145

Query: 179 LLYHYPSSIGVKV-GER*LTIGVEYPWKPSSCANCMRFGHNTNKCQT 42
                     ++      +TI  EY W PS C+N   FGH T  C T
Sbjct: 146 ASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNYNVFGHTTPLCAT 192


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