BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035144
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554715.1| PREDICTED: F-box protein At5g03970-like [Gly...    55   1e-05

>ref|XP_003554715.1| PREDICTED: F-box protein At5g03970-like [Glycine max]
          Length = 424

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
 Frame = +3

Query: 30  NIVTIELFSSEVPQWQVMNITCPFDFVFVLDNRPAIVREEEGRFYWIAFTQDAIKHVAIF 209
           N V+IE +SS+  QW+   + C   F         +V    G  +W A        +AI+
Sbjct: 208 NTVSIETYSSKTRQWKQSTLMCSTTFALCPRTAAMVVG---GVVHWFAMWGK----LAIY 260

Query: 210 EQ--GKENLDLVALPGGV---QSIGSVGLGQSDERIL-YARHDLCNLEIWILNEEN---- 359
           +   G   + L+ LP GV   +   SV LG+S + +L Y + +   LEIWIL +E+    
Sbjct: 261 DPRLGDRYIALIKLPTGVLTHEHEESV-LGESSDGLLQYGQSNNLGLEIWILEKESGANS 319

Query: 360 ----TCSR---EWSLIQKVSLQSPLKQYLKICSF-QNFAIVAFHPQNPLVIFVYSSKKMV 515
                C+    +W L  +++ +   KQ   + +  +   I++F PQN   IF+ S   ++
Sbjct: 320 SIYCNCTHLKYKWILRWRLNFKVLWKQMPSLSTHSKETQILSFLPQNSTSIFIRSGWNIL 379

Query: 516 RYDVENCKFELVCDFVANG----WKDYYFFFPYIWPHWP 620
             D+E    E+V ++   G    W+      PY  P WP
Sbjct: 380 LCDLETKTVEIV-NYQGRGGTISWESSK-VVPYFLPAWP 416