BLASTX nr result

ID: Coptis25_contig00035120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035120
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299902.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002513492.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002338252.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_003607377.1| hypothetical protein MTR_4g077160 [Medicago ...    76   3e-12

>ref|XP_002299902.1| predicted protein [Populus trichocarpa] gi|222847160|gb|EEE84707.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
 Frame = -2

Query: 375 VQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDKKKKECTR------IPRET 214
           +QSL+S++QEW+ KA SS+ K   L+ ++  L++E+ RL+    KE +R      +  + 
Sbjct: 353 IQSLNSAMQEWRQKALSSEAKENELQNQVAVLHVELERLRKASAKETSRSKNLPSVSLDA 412

Query: 213 QNEKEKHVLICRLKENLHSGNKNKDYWGGGNIERRKLHVCSNNSIAQKRSPLQNIGNSSP 34
            NE EK VL+CRLKEN ++ +  +      +  RRK H C+    A KRSP  +IGNSSP
Sbjct: 413 PNETEKRVLVCRLKENCNTNDDCRKQKAAFSDGRRKPHACTGGLDAPKRSPFGDIGNSSP 472


>ref|XP_002513492.1| conserved hypothetical protein [Ricinus communis]
           gi|223547400|gb|EEF48895.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 527

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 8/121 (6%)
 Frame = -2

Query: 375 VQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDKKKKECTRIPR------ET 214
           +QSL S+V+EWK KA SS++K + L+ +   L+ E+  LK +K KE +R         ++
Sbjct: 376 IQSLQSAVKEWKLKALSSESKASELQAQASMLSAELEGLKKEKAKERSRSKNLAPNSYDS 435

Query: 213 QNEKEKHVLICRLKENLHSGNKNKDYWGGGNIERRKLHVCSNNS--IAQKRSPLQNIGNS 40
            NE EK VL+CRLKEN H G   KD      + R+K++ CSN+S   A KRSP ++IGNS
Sbjct: 436 PNEMEKRVLVCRLKENHHHG---KDDGCSHTVGRKKVNACSNSSGLDAAKRSPFKDIGNS 492

Query: 39  S 37
           S
Sbjct: 493 S 493


>ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|222849752|gb|EEE87299.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 8/122 (6%)
 Frame = -2

Query: 375 VQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDKKKKECTR------IPRET 214
           +QSL+S+VQEW+ KA SS+ K   L+ ++  L  E+ RL+ ++ KE +R      I  E 
Sbjct: 364 IQSLNSAVQEWRQKALSSEAKANELQNQVAVLQEELERLRKERVKETSRSKNLPSISLEA 423

Query: 213 QNEKEKHVLICRLKENLHSGN--KNKDYWGGGNIERRKLHVCSNNSIAQKRSPLQNIGNS 40
            NE EK VL+CRLKEN ++ +  + K  +  G+   RK H C+    A KRS  ++IGNS
Sbjct: 424 PNETEKRVLVCRLKENRNTNDDCRQKKAFSDGS---RKPHACAGGLDAPKRSLFRDIGNS 480

Query: 39  SP 34
           SP
Sbjct: 481 SP 482


>ref|XP_002338252.1| predicted protein [Populus trichocarpa] gi|222871527|gb|EEF08658.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
 Frame = -2

Query: 354 VQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDKKKKECTR------IPRETQNEKEKH 193
           VQEW+ KA SS+ K   L+ ++  L  E+ RL+ ++ KE +R      I  E  NE EK 
Sbjct: 1   VQEWRQKALSSEAKANELQNQVAVLQEELERLRKERVKETSRSKNLPSISLEAPNETEKR 60

Query: 192 VLICRLKENLHSGN--KNKDYWGGGNIERRKLHVCSNNSIAQKRSPLQNIGNSSP 34
           VL+CRLKEN ++ +  + K  +  G+   RK H C+    A KRS  ++IGNSSP
Sbjct: 61  VLVCRLKENRNTNDDCRQKKAFSDGS---RKPHACAGGLDAPKRSLFRDIGNSSP 112


>ref|XP_003607377.1| hypothetical protein MTR_4g077160 [Medicago truncatula]
           gi|355508432|gb|AES89574.1| hypothetical protein
           MTR_4g077160 [Medicago truncatula]
          Length = 502

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
 Frame = -2

Query: 375 VQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDK----KKKECTRIPRETQN 208
           +QSLH+ VQEWK +A SS++K   +E K+  L ++  + +++    K  +C  +P +TQ 
Sbjct: 354 IQSLHNDVQEWKQRALSSESKKNEIEAKLSMLCVDFEKFQNEQNVVKGTKCPPVPLDTQK 413

Query: 207 EKEKHVLICRLKENLHSGNKNKDYWGGGNIERRKLHVCSNNSIAQKRSPLQNIGNSS 37
           E EK ++IC  KE   +  +N+ +        RK H      +  KR P Q+IGN+S
Sbjct: 414 EFEKRIVICSSKEKSSNVTENRKHGEVLRNGERKTHAARGGLLVPKRMPFQDIGNNS 470


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