BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035115
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598203.1| Pentatricopeptide repeat-containing protein ...   120   1e-25
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   118   4e-25
ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containi...   114   6e-24

>ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487251|gb|AES68454.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 503

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/65 (84%), Positives = 62/65 (95%)
 Frame = -3

Query: 245 EACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLF 66
           EACQYFVEMIEKGFLPQK+TFETLY+GLIQ+DMLRTWRRLKK+LD+ESITFGSEFQ+   
Sbjct: 439 EACQYFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLDQESITFGSEFQNYHL 498

Query: 65  KPYRR 51
           KPY+R
Sbjct: 499 KPYKR 503


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/65 (86%), Positives = 61/65 (93%)
 Frame = -3

Query: 245 EACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLF 66
           EAC++FVEMIEKG LPQK+TFETLYKGLIQ+DMLRTWRRLKKKLDEESITFGSEFQ+   
Sbjct: 484 EACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYQL 543

Query: 65  KPYRR 51
           KPYRR
Sbjct: 544 KPYRR 548


>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/65 (84%), Positives = 61/65 (93%)
 Frame = -3

Query: 245 EACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLF 66
           EAC +FVEMIEKG+LPQKITFETLY+GLIQ+DML+TWRRLKKKL+EESITFGSEFQ   F
Sbjct: 461 EACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQQYHF 520

Query: 65  KPYRR 51
           KPYRR
Sbjct: 521 KPYRR 525


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/65 (84%), Positives = 61/65 (93%)
 Frame = -3

Query: 245 EACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLF 66
           EAC +FVEMIEKG+LPQKITFETLY+GLIQ+DML+TWRRLKKKL+EESITFGSEFQ   F
Sbjct: 461 EACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQXYHF 520

Query: 65  KPYRR 51
           KPYRR
Sbjct: 521 KPYRR 525


>ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Glycine max]
          Length = 510

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/65 (84%), Positives = 58/65 (89%)
 Frame = -3

Query: 245 EACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLF 66
           EAC YFVEMIE GFLP K TFE+LY+GLIQADMLRTWRRLKKKLDEESITFGSEFQ+   
Sbjct: 446 EACHYFVEMIENGFLPLKGTFESLYRGLIQADMLRTWRRLKKKLDEESITFGSEFQNYQL 505

Query: 65  KPYRR 51
           KPYRR
Sbjct: 506 KPYRR 510