BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035101
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324059.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinu...    91   1e-16
ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_002881465.1| pentatricopeptide repeat-containing protein ...    87   1e-15
ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15

>ref|XP_002324059.1| predicted protein [Populus trichocarpa] gi|222867061|gb|EEF04192.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/91 (56%), Positives = 63/91 (69%)
 Frame = -1

Query: 275 NCNSNLFSTKKKCLSLLNTCSSIKHLNQIHAQILTYGLYADAFLVSEVLRICSLSPFKSL 96
           N NS L S K  CLSLL   SS+KH++QIHAQIL  GL  D  L++E++R CSLSP K L
Sbjct: 11  NSNSKLLSKKNHCLSLLKLSSSVKHVSQIHAQILVSGLQQDTNLLTELIRFCSLSPSKHL 70

Query: 95  TYARSLLFYSLDPITPSWNHVIRGYSGTPTP 3
           +YA SLL+ SLD + P WN +IRGY+    P
Sbjct: 71  SYAHSLLYNSLDSL-PPWNFLIRGYASGDAP 100


>ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223528509|gb|EEF30537.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 1157

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/79 (54%), Positives = 58/79 (73%)
 Frame = -1

Query: 239 CLSLLNTCSSIKHLNQIHAQILTYGLYADAFLVSEVLRICSLSPFKSLTYARSLLFYSLD 60
           CLSLL  CSSIKHL QIH+QI   GL  D FLV+++++  SLSP K L+YA+S+L +S+ 
Sbjct: 667 CLSLLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVH 726

Query: 59  PITPSWNHVIRGYSGTPTP 3
           P+   WN +IRGY+ + TP
Sbjct: 727 PVPLPWNILIRGYADSNTP 745


>ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
 Frame = -1

Query: 293 FPFPPKNCNSN--LFSTKKKCLSLLNTCSSIKHLNQIHAQILTYGLYADAFLVSEVLRIC 120
           FP    N +S     STK + LSLLN CSS  HL +IHAQIL  GL  D+F  +E+LR+ 
Sbjct: 13  FPINVHNYSSKPKFLSTKHQLLSLLNHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVA 72

Query: 119 SLSPFKSLTYARSLLFY-SLDPITPSWNHVIRGYSGTPTP 3
           +LSP ++L+Y  SLLF+      T  WN +IRGYS + +P
Sbjct: 73  ALSPSRNLSYGCSLLFHCHFHSATMPWNFIIRGYSSSDSP 112


>ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327304|gb|EFH57724.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 507

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/92 (46%), Positives = 60/92 (65%)
 Frame = -1

Query: 278 KNCNSNLFSTKKKCLSLLNTCSSIKHLNQIHAQILTYGLYADAFLVSEVLRICSLSPFKS 99
           ++ +S+  S K +CL  L  CSSIKHL QIH QI    L  D+F++SE++R+ SLS  K 
Sbjct: 3   RSLDSSFKSKKHQCLIFLKLCSSIKHLLQIHGQIHVSSLQNDSFIISELIRVSSLSHTKD 62

Query: 98  LTYARSLLFYSLDPITPSWNHVIRGYSGTPTP 3
           L +AR+LL +S D    +WN + RGYS + TP
Sbjct: 63  LAFARTLLLHSSDSTPSTWNMLTRGYSSSDTP 94


>ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
 Frame = -1

Query: 293 FPFPPKNCNSN--LFSTKKKCLSLLNTCSSIKHLNQIHAQILTYGLYADAFLVSEVLRIC 120
           FP    N +S     STK + LSLL  CSS  HL +IHAQIL  GL  D+F  +E+LR+ 
Sbjct: 13  FPINVHNYSSKPKFLSTKHQLLSLLKHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVA 72

Query: 119 SLSPFKSLTYARSLLFY-SLDPITPSWNHVIRGYSGTPTP 3
           +LSP ++L+Y  SLLF+      T  WN +IRGYS + +P
Sbjct: 73  ALSPSRNLSYGCSLLFHCHFHSATMPWNFIIRGYSSSDSP 112