BLASTX nr result

ID: Coptis25_contig00035098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035098
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867146.1| hypothetical protein ARALYDRAFT_491288 [Arab...    62   5e-08
emb|CAA19872.1| putative protein [Arabidopsis thaliana] gi|72703...    62   5e-08
ref|NP_567940.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) famil...    62   5e-08
ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002867146.1| hypothetical protein ARALYDRAFT_491288 [Arabidopsis lyrata subsp.
           lyrata] gi|297312982|gb|EFH43405.1| hypothetical protein
           ARALYDRAFT_491288 [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +3

Query: 285 GFIGWYLGMLESRPILTKSITSSLIYTFADLSSQ 386
           GFIGWYLGM++SRP+LTKS+TSSLIY  ADLSSQ
Sbjct: 79  GFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQ 112


>emb|CAA19872.1| putative protein [Arabidopsis thaliana] gi|7270339|emb|CAB80107.1|
           putative protein [Arabidopsis thaliana]
          Length = 568

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +3

Query: 285 GFIGWYLGMLESRPILTKSITSSLIYTFADLSSQ 386
           GFIGWYLGM++SRP+LTKS+TSSLIY  ADLSSQ
Sbjct: 81  GFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQ 114


>ref|NP_567940.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
           [Arabidopsis thaliana]
           gi|11762212|gb|AAG40384.1|AF325032_1 AT4g33900
           [Arabidopsis thaliana] gi|332660891|gb|AEE86291.1|
           Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
           [Arabidopsis thaliana]
          Length = 261

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +3

Query: 285 GFIGWYLGMLESRPILTKSITSSLIYTFADLSSQ 386
           GFIGWYLGM++SRP+LTKS+TSSLIY  ADLSSQ
Sbjct: 81  GFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQ 114


>ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|222846025|gb|EEE83572.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +3

Query: 279 KNGFIGWYLGMLESRPILTKSITSSLIYTFADLSSQ 386
           K GFIGWYLGM++SRPILTKS TSSLIY  ADLSSQ
Sbjct: 11  KIGFIGWYLGMVKSRPILTKSATSSLIYIAADLSSQ 46


>ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|222849576|gb|EEE87123.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = +3

Query: 279 KNGFIGWYLGMLESRPILTKSITSSLIYTFADLSSQ 386
           K GF+GWYLGM++SRP+LTKS TSSLIY  ADLSSQ
Sbjct: 11  KFGFVGWYLGMVKSRPVLTKSATSSLIYIAADLSSQ 46


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