BLASTX nr result

ID: Coptis25_contig00035096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035096
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...   263   9e-69
emb|CBI30713.3| unnamed protein product [Vitis vinifera]              243   9e-63
ref|XP_002522238.1| wd40 protein, putative [Ricinus communis] gi...   238   3e-61
ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   225   3e-57
ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   225   3e-57

>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
           [Vitis vinifera]
          Length = 1360

 Score =  263 bits (673), Expect = 9e-69
 Identities = 125/175 (71%), Positives = 150/175 (85%), Gaps = 1/175 (0%)
 Frame = -1

Query: 523 GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 344
           G +KIIDIRQ CL+KTLRSGHTSICSSV+FLPWRPWEVITGGLD+KLVMWDFSKGRP KI
Sbjct: 121 GDVKIIDIRQKCLFKTLRSGHTSICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKI 180

Query: 343 MDFGLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 164
           +DFG+PDME+  S GQC NPAF+HA+A+PEVDML+KSGK+C VARGDGVVDVI+IESE+A
Sbjct: 181 VDFGMPDMENSSSAGQCLNPAFVHAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELA 240

Query: 163 SSKLKSSIRPRTGSQSSSGNVKPAATTT-TLIQESGKRLHLDNSLGGHTAAVSCV 2
           +++ K+S +P+ GS+S S +    +T   TL Q   +RLHLD SLGGHTA+VSCV
Sbjct: 241 AAQSKTSSKPQRGSKSRSKSKGSVSTVAETLNQNGRRRLHLDYSLGGHTASVSCV 295


>emb|CBI30713.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  243 bits (621), Expect = 9e-63
 Identities = 117/174 (67%), Positives = 137/174 (78%)
 Frame = -1

Query: 523 GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 344
           G +KIIDIRQ CL+KTLRSGHTSICSSV+FLPWRPWEVITGGLD+KLVMWDFSKGRP KI
Sbjct: 121 GDVKIIDIRQKCLFKTLRSGHTSICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKI 180

Query: 343 MDFGLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 164
           +DFG+PDME+  S GQC NPAF+HA+A+PEVDML+KSGK+C VARGDGVVDVI+IESE+A
Sbjct: 181 VDFGMPDMENSSSAGQCLNPAFVHAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELA 240

Query: 163 SSKLKSSIRPRTGSQSSSGNVKPAATTTTLIQESGKRLHLDNSLGGHTAAVSCV 2
           ++ +                   +    TL Q   +RLHLD SLGGHTA+VSCV
Sbjct: 241 AAHV-------------------STVAETLNQNGRRRLHLDYSLGGHTASVSCV 275


>ref|XP_002522238.1| wd40 protein, putative [Ricinus communis]
           gi|223538491|gb|EEF40096.1| wd40 protein, putative
           [Ricinus communis]
          Length = 1458

 Score =  238 bits (608), Expect = 3e-61
 Identities = 114/174 (65%), Positives = 137/174 (78%)
 Frame = -1

Query: 523 GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 344
           G +KIIDIRQHCL+KTLR+GHTSICSSVQF+PWRPW VITGGLD+KLVMWDFSKGRP KI
Sbjct: 121 GNVKIIDIRQHCLFKTLRAGHTSICSSVQFIPWRPWGVITGGLDSKLVMWDFSKGRPTKI 180

Query: 343 MDFGLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 164
           +DFGLP+M+   +  QC NPAF+HA+A+P+ DMLDKSGK+C VARGDG+VDVI+IESE+A
Sbjct: 181 VDFGLPEMKDSNT-TQCVNPAFVHAIAVPDADMLDKSGKICVVARGDGIVDVINIESELA 239

Query: 163 SSKLKSSIRPRTGSQSSSGNVKPAATTTTLIQESGKRLHLDNSLGGHTAAVSCV 2
           + + K + + R GSQS+S +    A T          LH D SLGGH AA SCV
Sbjct: 240 AVRTKITTKARKGSQSTSKDSNTTAGT------QSSMLHFDYSLGGHVAAASCV 287


>ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
           subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1390

 Score =  225 bits (574), Expect = 3e-57
 Identities = 108/174 (62%), Positives = 132/174 (75%)
 Frame = -1

Query: 523 GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 344
           G +KIID+  +CLYKTLRSGHTSICSSVQFLPWRPWEVITGGLD+KL+MWDFS+GRP + 
Sbjct: 123 GDVKIIDVHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIQA 182

Query: 343 MDFGLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 164
           +DF +PD     S GQCFNPAFIHA+A+PEV+MLD+ G++C VARGDG+V VIDIESE  
Sbjct: 183 LDFDIPDNHPSSSTGQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESE-- 240

Query: 163 SSKLKSSIRPRTGSQSSSGNVKPAATTTTLIQESGKRLHLDNSLGGHTAAVSCV 2
             K K+S +     Q+ S  V  A       Q   K+L+LD ++GGH+AAVSCV
Sbjct: 241 --KSKTSSKTGKKVQTRSKGVTAACDMNNQEQTGRKKLYLDYTVGGHSAAVSCV 292


>ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
           subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1362

 Score =  225 bits (573), Expect = 3e-57
 Identities = 108/174 (62%), Positives = 132/174 (75%)
 Frame = -1

Query: 523 GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 344
           G +KIID+  +CLYKTLRSGHTSICSSVQFLPWRPWEVITGGLD+KL+MWDFS+GRP ++
Sbjct: 123 GDVKIIDVHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIQV 182

Query: 343 MDFGLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 164
           +DF +PD     S  QCFNPAFIHA+A+PEV+MLD+ G++C VARGDG+V VIDIESE  
Sbjct: 183 LDFDIPDNHPSSSTEQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESE-- 240

Query: 163 SSKLKSSIRPRTGSQSSSGNVKPAATTTTLIQESGKRLHLDNSLGGHTAAVSCV 2
             K K+S +     QS S  V  A       Q   K+L+LD ++GGH+AAVSCV
Sbjct: 241 --KSKTSSKTGKKVQSRSKGVTAACDMNNQEQTGRKKLYLDYTVGGHSAAVSCV 292


Top