BLASTX nr result

ID: Coptis25_contig00035094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035094
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   197   1e-48
ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802...   191   7e-47
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46
ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...   188   5e-46
emb|CBI27491.3| unnamed protein product [Vitis vinifera]              188   5e-46

>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  197 bits (500), Expect = 1e-48
 Identities = 94/147 (63%), Positives = 122/147 (82%)
 Frame = -3

Query: 442  KAVIQVKKELDQLDDLLNGDSILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVVNLLLKL 263
            K +++VKKE DQL+DLL GDS  FKSARWKVLFS+NFRKSFG L S + + S +NLLLKL
Sbjct: 872  KTILEVKKEFDQLNDLLTGDSAFFKSARWKVLFSENFRKSFGKLSSVRKKTSALNLLLKL 931

Query: 262  SGGWRPKKRNVESQCENSAQLVQQFKVEGLYLISTIDIVKQPLFSQVLKIWDIIPLEEIS 83
            S GWRPK +NV+S C +S +L++Q+KVEGLY+I +IDIVK+ +++QVLK+WDI+PLE+I 
Sbjct: 932  SSGWRPKTKNVDSIC-HSYRLLKQYKVEGLYIICSIDIVKERMYTQVLKVWDILPLEDIP 990

Query: 82   KLVKRLDHIFAMYTDDFISRCKVKHIE 2
            +L KRLD IF  YTDDF++RCK K +E
Sbjct: 991  RLAKRLDGIFGSYTDDFMNRCKEKCLE 1017


>ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
          Length = 2812

 Score =  191 bits (484), Expect = 7e-47
 Identities = 91/147 (61%), Positives = 118/147 (80%)
 Frame = -3

Query: 442  KAVIQVKKELDQLDDLLNGDSILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVVNLLLKL 263
            K++   KKELDQLDDLLN DS LFK +RWKVLFSDNF KSF  L+S Q +K V++LLLKL
Sbjct: 860  KSIWDTKKELDQLDDLLNPDSFLFKKSRWKVLFSDNFLKSFKKLRSKQTKKLVLDLLLKL 919

Query: 262  SGGWRPKKRNVESQCENSAQLVQQFKVEGLYLISTIDIVKQPLFSQVLKIWDIIPLEEIS 83
            S GWRPK+  V+  C NS+Q+++QFKVE L+++ + DIVK+ +++QVLKIWDI+PLE++ 
Sbjct: 920  STGWRPKRMKVDLLCGNSSQILKQFKVESLFVVCSTDIVKESMYTQVLKIWDIMPLEDVP 979

Query: 82   KLVKRLDHIFAMYTDDFISRCKVKHIE 2
            KLVKRLD+IF  YTD+FIS C  K +E
Sbjct: 980  KLVKRLDNIFGSYTDEFISCCSEKCLE 1006


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  190 bits (482), Expect = 1e-46
 Identities = 91/147 (61%), Positives = 119/147 (80%)
 Frame = -3

Query: 442  KAVIQVKKELDQLDDLLNGDSILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVVNLLLKL 263
            KA+++VKKE DQLDDL+ GDS LF+SARWKVLFS+ F+KSFG L S + +  V+NLLLKL
Sbjct: 699  KAILEVKKEFDQLDDLIKGDSALFRSARWKVLFSEYFKKSFGKLASVRKKTPVLNLLLKL 758

Query: 262  SGGWRPKKRNVESQCENSAQLVQQFKVEGLYLISTIDIVKQPLFSQVLKIWDIIPLEEIS 83
            S GWRPKKR+V+  C +S+Q+++QFKVEGLY+I +IDIVK+  ++QVLK+WD++ LE+I 
Sbjct: 759  SSGWRPKKRSVDFICGSSSQILKQFKVEGLYVICSIDIVKEICYTQVLKVWDLLALEDIP 818

Query: 82   KLVKRLDHIFAMYTDDFISRCKVKHIE 2
             L KRL+ IF  YTDDFIS C  K +E
Sbjct: 819  ILAKRLEGIFETYTDDFISHCNEKCLE 845


>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score =  188 bits (477), Expect = 5e-46
 Identities = 89/147 (60%), Positives = 120/147 (81%)
 Frame = -3

Query: 442  KAVIQVKKELDQLDDLLNGDSILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVVNLLLKL 263
            KA++++K E DQLD LL+G SILFK+ARWKVLFS+NFRKSF  L+S + +KSV+ LLL L
Sbjct: 871  KAILEIKTEFDQLDRLLDGSSILFKNARWKVLFSNNFRKSFVKLRSDRTKKSVMKLLLNL 930

Query: 262  SGGWRPKKRNVESQCENSAQLVQQFKVEGLYLISTIDIVKQPLFSQVLKIWDIIPLEEIS 83
            S GWRPK+ N++  C +S+Q+++QFKVEG Y++ +IDIVK    +QVL++WDI+PLE+I 
Sbjct: 931  SSGWRPKRLNIDRVCGSSSQILKQFKVEGFYIVCSIDIVKN---TQVLRVWDILPLEDIL 987

Query: 82   KLVKRLDHIFAMYTDDFISRCKVKHIE 2
            KLVK LD+IF  YTDDFI+RCK K ++
Sbjct: 988  KLVKHLDNIFQRYTDDFINRCKEKCLD 1014


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score =  188 bits (477), Expect = 5e-46
 Identities = 89/147 (60%), Positives = 120/147 (81%)
 Frame = -3

Query: 442  KAVIQVKKELDQLDDLLNGDSILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVVNLLLKL 263
            KA++++K E DQLD LL+G SILFK+ARWKVLFS+NFRKSF  L+S + +KSV+ LLL L
Sbjct: 4254 KAILEIKTEFDQLDRLLDGSSILFKNARWKVLFSNNFRKSFVKLRSDRTKKSVMKLLLNL 4313

Query: 262  SGGWRPKKRNVESQCENSAQLVQQFKVEGLYLISTIDIVKQPLFSQVLKIWDIIPLEEIS 83
            S GWRPK+ N++  C +S+Q+++QFKVEG Y++ +IDIVK    +QVL++WDI+PLE+I 
Sbjct: 4314 SSGWRPKRLNIDRVCGSSSQILKQFKVEGFYIVCSIDIVKN---TQVLRVWDILPLEDIL 4370

Query: 82   KLVKRLDHIFAMYTDDFISRCKVKHIE 2
            KLVK LD+IF  YTDDFI+RCK K ++
Sbjct: 4371 KLVKHLDNIFQRYTDDFINRCKEKCLD 4397


Top