BLASTX nr result
ID: Coptis25_contig00035089
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035089 (347 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284732.1| PREDICTED: protein CYPRO4 [Vitis vinifera] 65 2e-19 emb|CAN82150.1| hypothetical protein VITISV_043502 [Vitis vinifera] 65 2e-19 emb|CBI19522.3| unnamed protein product [Vitis vinifera] 55 1e-11 ref|XP_003518840.1| PREDICTED: protein CYPRO4-like [Glycine max] 73 3e-11 ref|NP_001234563.1| dem protein [Solanum lycopersicum] gi|219041... 70 2e-10 >ref|XP_002284732.1| PREDICTED: protein CYPRO4 [Vitis vinifera] Length = 632 Score = 65.1 bits (157), Expect(2) = 2e-19 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 11/63 (17%) Frame = +2 Query: 104 HTPKAKWIVSDKLTTYTFVKS-----------SEDENEETWWLLRVGDKVRVKVGTEMHL 250 +TPKAKW+ S+KLT+Y+F+K+ ++E E+WW+L+VG KVR KV EM L Sbjct: 82 NTPKAKWVTSEKLTSYSFLKTCGNGGSDDDEQDDEEGGESWWILKVGSKVRAKVALEMQL 141 Query: 251 RMF 259 + F Sbjct: 142 KTF 144 Score = 55.1 bits (131), Expect(2) = 2e-19 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +1 Query: 250 ENVYRVEATEANKVKVYGKDFVGWAKGEVADD 345 EN Y E+T+ANK+KVYGKDF+GW K EVADD Sbjct: 181 ENTYGFESTDANKLKVYGKDFIGWVKPEVADD 212 >emb|CAN82150.1| hypothetical protein VITISV_043502 [Vitis vinifera] Length = 632 Score = 65.1 bits (157), Expect(2) = 2e-19 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 11/63 (17%) Frame = +2 Query: 104 HTPKAKWIVSDKLTTYTFVKS-----------SEDENEETWWLLRVGDKVRVKVGTEMHL 250 +TPKAKW+ S+KLT+Y+F+K+ ++E E+WW+L+VG KVR KV EM L Sbjct: 82 NTPKAKWVTSEKLTSYSFLKTCGNGGSDDDEQDDEEGGESWWILKVGSKVRAKVALEMQL 141 Query: 251 RMF 259 + F Sbjct: 142 KTF 144 Score = 55.1 bits (131), Expect(2) = 2e-19 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +1 Query: 250 ENVYRVEATEANKVKVYGKDFVGWAKGEVADD 345 EN Y E+T+ANK+KVYGKDF+GW K EVADD Sbjct: 181 ENTYGFESTDANKLKVYGKDFIGWVKPEVADD 212 >emb|CBI19522.3| unnamed protein product [Vitis vinifera] Length = 506 Score = 55.1 bits (131), Expect(2) = 1e-11 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +1 Query: 250 ENVYRVEATEANKVKVYGKDFVGWAKGEVADD 345 EN Y E+T+ANK+KVYGKDF+GW K EVADD Sbjct: 118 ENTYGFESTDANKLKVYGKDFIGWVKPEVADD 149 Score = 38.9 bits (89), Expect(2) = 1e-11 Identities = 15/26 (57%), Positives = 22/26 (84%) Frame = +2 Query: 104 HTPKAKWIVSDKLTTYTFVKSSEDEN 181 +TPKAKW+ S+KLT+Y+F+K+ E N Sbjct: 82 NTPKAKWVTSEKLTSYSFLKTYEYRN 107 >ref|XP_003518840.1| PREDICTED: protein CYPRO4-like [Glycine max] Length = 603 Score = 72.8 bits (177), Expect = 3e-11 Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 7/88 (7%) Frame = +2 Query: 44 KFQTPTATLDEVDLTQ---KNYLH----TPKAKWIVSDKLTTYTFVKSSEDENEETWWLL 202 K+QTP+++ + L Q K YLH TP AKWI+SDK T+Y F+K S+DEN+ W+ L Sbjct: 52 KYQTPSSSSSK-SLPQNAVKLYLHIGATTPNAKWILSDKRTSYAFLKDSDDENDAVWF-L 109 Query: 203 RVGDKVRVKVGTEMHLRMFIGWKRLRLI 286 VG KVR +V +EM L+MF +R+ + Sbjct: 110 TVGSKVRARVSSEMQLKMFGDQRRVDFV 137 >ref|NP_001234563.1| dem protein [Solanum lycopersicum] gi|2190419|emb|CAA73973.1| dem [Solanum lycopersicum] Length = 644 Score = 70.1 bits (170), Expect = 2e-10 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 14/95 (14%) Frame = +2 Query: 44 KFQTPTATLDEVDLTQKNYLH----TPKAKWIVSDKLTTYTFVKSS------EDENEET- 190 K+ TP A K YLH T +KW+VSDK+T Y+FVKS +DENEET Sbjct: 71 KYGTPHAKTPTAKNAVKLYLHVGGNTANSKWVVSDKVTAYSFVKSGSEDGSDDDENEETE 130 Query: 191 ---WWLLRVGDKVRVKVGTEMHLRMFIGWKRLRLI 286 WW+L++G KVR K+ + L+ F KR+ + Sbjct: 131 ENAWWVLKIGSKVRAKIDENLQLKAFKEQKRVDFV 165