BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035086
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   121   1e-25
ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   116   2e-24
emb|CBI24913.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   116   2e-24
tpg|DAA38413.1| TPA: hypothetical protein ZEAMMB73_072134 [Zea m...   112   3e-23

>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score =  121 bits (303), Expect = 1e-25
 Identities = 57/93 (61%), Positives = 73/93 (78%)
 Frame = +2

Query: 5   GTYKPNIRQMVKPLLGIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSV 184
           G  +PN+R +VKPLLG+F+SEPGNGLWKR+ADAA + C T+KSF EETL AIPD+VLDS 
Sbjct: 283 GNNRPNVRDVVKPLLGLFYSEPGNGLWKRRADAAFQSCTTIKSFFEETLVAIPDTVLDSP 342

Query: 185 PSDIPSCGENAFGDVRGSLPLPYSFREQEKVYA 283
            ++ PS  ++ F +VRG LP PY+ REQ+  YA
Sbjct: 343 IAEAPSGRQDLFTNVRGLLPPPYATREQDVAYA 375


>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
           vinifera]
          Length = 377

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
 Frame = +2

Query: 5   GTYKPNIRQMVKPLLGIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSV 184
           G ++P+IR++VKPLL  F+SEPGNGLWKRKADAA  HC+T+KSFLEETL AIPDSVLD+ 
Sbjct: 283 GPHRPSIREVVKPLLHFFYSEPGNGLWKRKADAAFFHCKTIKSFLEETLVAIPDSVLDAP 342

Query: 185 PSDIPSCGENAFGDVRGSLPLPY--SFREQEKVYA 283
            +  PS  E+ F ++   LPLPY  S +EQE +YA
Sbjct: 343 VAKAPSGREDLFANLSDLLPLPYETSEQEQEVLYA 377


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
 Frame = +2

Query: 5   GTYKPNIRQMVKPLLGIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSV 184
           G ++P+IR++VKPLL  F+SEPGNGLWKRKADAA  HC+T+KSFLEETL AIPDSVLD+ 
Sbjct: 329 GPHRPSIREVVKPLLHFFYSEPGNGLWKRKADAAFFHCKTIKSFLEETLVAIPDSVLDAP 388

Query: 185 PSDIPSCGENAFGDVRGSLPLPY--SFREQEKVYA 283
            +  PS  E+ F ++   LPLPY  S +EQE +YA
Sbjct: 389 VAKAPSGREDLFANLSDLLPLPYETSEQEQEVLYA 423


>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
 Frame = +2

Query: 5   GTYKPNIRQMVKPLLGIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSV 184
           G ++P+IR++VKPLL  F+SEPGNGLWKRKADAA  HC+T+KSFLEETL AIPDSVLD+ 
Sbjct: 339 GPHRPSIREVVKPLLHFFYSEPGNGLWKRKADAAFFHCKTIKSFLEETLVAIPDSVLDAP 398

Query: 185 PSDIPSCGENAFGDVRGSLPLPY--SFREQEKVYA 283
            +  PS  E+ F ++   LPLPY  S +EQE +YA
Sbjct: 399 VAKAPSGREDLFANLSDLLPLPYETSEQEQEVLYA 433


>tpg|DAA38413.1| TPA: hypothetical protein ZEAMMB73_072134 [Zea mays]
          Length = 263

 Score =  112 bits (281), Expect = 3e-23
 Identities = 55/93 (59%), Positives = 67/93 (72%)
 Frame = +2

Query: 5   GTYKPNIRQMVKPLLGIFHSEPGNGLWKRKADAALRHCETLKSFLEETLDAIPDSVLDSV 184
           G  +PN+RQ+VKPLL +FHSEPGN LWKRKAD+ALRHC+T+K+FLEETLDAI DSVLD  
Sbjct: 168 GPSRPNVRQLVKPLLNLFHSEPGNSLWKRKADSALRHCKTVKTFLEETLDAISDSVLDKP 227

Query: 185 PSDIPSCGENAFGDVRGSLPLPYSFREQEKVYA 283
            +  PS  E  F  V   LP  Y+    E++ A
Sbjct: 228 VNREPSSDEEYFASVDSLLPPKYTTPMHERLVA 260