BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035083
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containi...    88   2e-15
ref|XP_002326752.1| predicted protein [Populus trichocarpa] gi|2...    88   2e-15
gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japo...    87   2e-15

>ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Cucumis sativus]
           gi|449508034|ref|XP_004163198.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g31920-like [Cucumis sativus]
          Length = 606

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = -2

Query: 654 KNLRSCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 517
           +NLR CNDCHS+ KL+S I++REI VRDRNRFHHF+DG CSCRDYW
Sbjct: 561 RNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKDGNCSCRDYW 606


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 37/46 (80%), Positives = 40/46 (86%)
 Frame = -2

Query: 654 KNLRSCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 517
           KNLR C DCHS  KLISK++ REIIVRDRNRFHHF+DGLCSC DYW
Sbjct: 700 KNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745


>ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 572

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -2

Query: 654 KNLRSCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 517
           KNLRSC DCH F+KLISKI+KR+IIVRDR RFHHF++G CSC+DYW
Sbjct: 527 KNLRSCEDCHEFMKLISKIYKRDIIVRDRIRFHHFKNGECSCKDYW 572


>ref|XP_002326752.1| predicted protein [Populus trichocarpa] gi|222834074|gb|EEE72551.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = -2

Query: 654 KNLRSCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 517
           +NLR CNDCH++ KLIS I++REI VRDRNRFHHF+DG CSCRDYW
Sbjct: 514 RNLRMCNDCHTYTKLISVIYQREITVRDRNRFHHFKDGTCSCRDYW 559


>gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
          Length = 706

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = -2

Query: 654 KNLRSCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 517
           KNLR C DCH + K+ISK+F REI++RDRNRFHHF+DG CSC+DYW
Sbjct: 661 KNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706