BLASTX nr result

ID: Coptis25_contig00035082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035082
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA21111.1| endo-1,4-beta-glucanase [Gossypium hirsutum]           74   2e-11
gb|AFZ78641.1| korrigan [Populus tomentosa]                            68   7e-10
ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichoc...    68   7e-10
gb|ABK96199.1| unknown [Populus trichocarpa]                           68   7e-10
emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica]               68   7e-10

>dbj|BAA21111.1| endo-1,4-beta-glucanase [Gossypium hirsutum]
          Length = 324

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = +2

Query: 29  GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160
           GLTKS  SYGF  WL+SL AGKSLEFVY+H+ASPAD+SVS+YN+
Sbjct: 280 GLTKSGNSYGFPEWLNSLPAGKSLEFVYIHAASPADVSVSSYNI 323


>gb|AFZ78641.1| korrigan [Populus tomentosa]
          Length = 622

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +2

Query: 29  GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160
           GLTKS  SY F +W+ SL AGKSLEFVY+HSAS ADISVS+Y+L
Sbjct: 578 GLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISVSSYSL 621


>ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9
           [Populus trichocarpa] gi|347466589|gb|AEO97207.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 622

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +2

Query: 29  GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160
           GLTKS  SY F +W+ SL AGKSLEFVY+HSAS ADISVS+Y+L
Sbjct: 578 GLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISVSSYSL 621


>gb|ABK96199.1| unknown [Populus trichocarpa]
          Length = 280

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +2

Query: 29  GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160
           GLTKS  SY F +W+ SL AGKSLEFVY+HSAS ADISVS+Y+L
Sbjct: 236 GLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISVSSYSL 279


>emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica]
          Length = 620

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/44 (68%), Positives = 40/44 (90%)
 Frame = +2

Query: 29  GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160
           GLTK+  SY F +W++SL+AGKSLEFVY+HSASPAD++VS+Y+L
Sbjct: 576 GLTKAGDSYVFPSWINSLSAGKSLEFVYIHSASPADVAVSSYSL 619


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