BLASTX nr result
ID: Coptis25_contig00035082
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035082 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA21111.1| endo-1,4-beta-glucanase [Gossypium hirsutum] 74 2e-11 gb|AFZ78641.1| korrigan [Populus tomentosa] 68 7e-10 ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichoc... 68 7e-10 gb|ABK96199.1| unknown [Populus trichocarpa] 68 7e-10 emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica] 68 7e-10 >dbj|BAA21111.1| endo-1,4-beta-glucanase [Gossypium hirsutum] Length = 324 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/44 (75%), Positives = 39/44 (88%) Frame = +2 Query: 29 GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160 GLTKS SYGF WL+SL AGKSLEFVY+H+ASPAD+SVS+YN+ Sbjct: 280 GLTKSGNSYGFPEWLNSLPAGKSLEFVYIHAASPADVSVSSYNI 323 >gb|AFZ78641.1| korrigan [Populus tomentosa] Length = 622 Score = 68.2 bits (165), Expect = 7e-10 Identities = 32/44 (72%), Positives = 37/44 (84%) Frame = +2 Query: 29 GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160 GLTKS SY F +W+ SL AGKSLEFVY+HSAS ADISVS+Y+L Sbjct: 578 GLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISVSSYSL 621 >ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|347466589|gb|AEO97207.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase [Populus trichocarpa] Length = 622 Score = 68.2 bits (165), Expect = 7e-10 Identities = 32/44 (72%), Positives = 37/44 (84%) Frame = +2 Query: 29 GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160 GLTKS SY F +W+ SL AGKSLEFVY+HSAS ADISVS+Y+L Sbjct: 578 GLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISVSSYSL 621 >gb|ABK96199.1| unknown [Populus trichocarpa] Length = 280 Score = 68.2 bits (165), Expect = 7e-10 Identities = 32/44 (72%), Positives = 37/44 (84%) Frame = +2 Query: 29 GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160 GLTKS SY F +W+ SL AGKSLEFVY+HSAS ADISVS+Y+L Sbjct: 236 GLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISVSSYSL 279 >emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica] Length = 620 Score = 68.2 bits (165), Expect = 7e-10 Identities = 30/44 (68%), Positives = 40/44 (90%) Frame = +2 Query: 29 GLTKSAGSYGFLAWLDSLAAGKSLEFVYVHSASPADISVSTYNL 160 GLTK+ SY F +W++SL+AGKSLEFVY+HSASPAD++VS+Y+L Sbjct: 576 GLTKAGDSYVFPSWINSLSAGKSLEFVYIHSASPADVAVSSYSL 619