BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035076
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              194   5e-48
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   194   5e-48
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  194 bits (494), Expect = 5e-48
 Identities = 96/143 (67%), Positives = 112/143 (78%)
 Frame = -1

Query: 429 ISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGP 250
           IS   +EGKLK+AFIYLSE+LSR LKPDI  YNA++SGVF +G+WKHA +I HEM++ G 
Sbjct: 385 ISWCCREGKLKNAFIYLSEILSRDLKPDICSYNAIISGVFKEGLWKHAQDILHEMVDMGI 444

Query: 249 APDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVK 70
            PDL TFRVLLAGYCK RRF EAKA V EMVN+G++QL   EDPLSKAF +L   P  ++
Sbjct: 445 KPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPLSKAFMVLELDPLAIR 504

Query: 69  VKRDNDAGLSKAEFFDTLGNGFY 1
           VKRDND G SK EFFD LGNG Y
Sbjct: 505 VKRDNDVGFSKTEFFDNLGNGLY 527


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Vitis vinifera]
          Length = 1273

 Score =  194 bits (494), Expect = 5e-48
 Identities = 96/143 (67%), Positives = 112/143 (78%)
 Frame = -1

Query: 429 ISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGP 250
           IS   +EGKLK+AFIYLSE+LSR LKPDI  YNA++SGVF +G+WKHA +I HEM++ G 
Sbjct: 402 ISWCCREGKLKNAFIYLSEILSRDLKPDICSYNAIISGVFKEGLWKHAQDILHEMVDMGI 461

Query: 249 APDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVK 70
            PDL TFRVLLAGYCK RRF EAKA V EMVN+G++QL   EDPLSKAF +L   P  ++
Sbjct: 462 KPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPLSKAFMVLELDPLAIR 521

Query: 69  VKRDNDAGLSKAEFFDTLGNGFY 1
           VKRDND G SK EFFD LGNG Y
Sbjct: 522 VKRDNDVGFSKTEFFDNLGNGLY 544


>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1225

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/140 (60%), Positives = 106/140 (75%)
 Frame = -1

Query: 420 SSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGPAPD 241
           S  EG L+ AFIY+SELLS  LKPD+H YNAL+SG+F KG+W++A  I  EM++ G  P+
Sbjct: 376 SCHEGNLRQAFIYMSELLSSGLKPDLHSYNALISGMFKKGLWENAQGILAEMVDQGIEPN 435

Query: 240 LSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVKVKR 61
           LSTFR+LLAGYCK R+F EAK IV+EM   G ++LS V+D L K F  LGF  S V++KR
Sbjct: 436 LSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVDDQLCKIFSFLGFSESSVRLKR 495

Query: 60  DNDAGLSKAEFFDTLGNGFY 1
           DN+ G+SK EFFDTLGNG Y
Sbjct: 496 DNNTGVSKTEFFDTLGNGLY 515


>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1246

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/140 (60%), Positives = 106/140 (75%)
 Frame = -1

Query: 420 SSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGPAPD 241
           S  EG L+ AFIY+SELLS  LKPD+H YNAL+SG+F KG+W++A  I  EM++ G  P+
Sbjct: 376 SCHEGNLRQAFIYMSELLSSGLKPDLHSYNALISGMFKKGLWENAQGILAEMVDQGIEPN 435

Query: 240 LSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVKVKR 61
           LSTFR+LLAGYCK R+F EAK IV+EM   G ++LS V+D L K F  LGF  S V++KR
Sbjct: 436 LSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVDDQLCKIFSFLGFSESSVRLKR 495

Query: 60  DNDAGLSKAEFFDTLGNGFY 1
           DN+ G+SK EFFDTLGNG Y
Sbjct: 496 DNNTGVSKTEFFDTLGNGLY 515


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
           predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  171 bits (434), Expect = 4e-41
 Identities = 82/138 (59%), Positives = 105/138 (76%)
 Frame = -1

Query: 414 KEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGPAPDLS 235
           +E KL  AF YLSELLSR LKP+I CY+AL+S +F +GMW+HA +I  EM++ G AP LS
Sbjct: 292 RERKLSGAFNYLSELLSRGLKPNIWCYHALISALFKEGMWEHAQDILDEMVDMGTAPVLS 351

Query: 234 TFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVKVKRDN 55
           TF++LLAGYC+ RRF+E K ++ EMVN G+++ S +EDPLSKAF +L  K   V++KRDN
Sbjct: 352 TFKILLAGYCRARRFDEVKVVIHEMVNRGLIESSALEDPLSKAFMVLELKTLSVRLKRDN 411

Query: 54  DAGLSKAEFFDTLGNGFY 1
           D   SK EFFD LGNG Y
Sbjct: 412 DVEFSKTEFFDNLGNGLY 429