BLASTX nr result
ID: Coptis25_contig00035076
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035076 (429 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22241.3| unnamed protein product [Vitis vinifera] 194 5e-48 ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi... 194 5e-48 ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi... 175 4e-42 ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi... 175 4e-42 ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2... 171 4e-41 >emb|CBI22241.3| unnamed protein product [Vitis vinifera] Length = 1256 Score = 194 bits (494), Expect = 5e-48 Identities = 96/143 (67%), Positives = 112/143 (78%) Frame = -1 Query: 429 ISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGP 250 IS +EGKLK+AFIYLSE+LSR LKPDI YNA++SGVF +G+WKHA +I HEM++ G Sbjct: 385 ISWCCREGKLKNAFIYLSEILSRDLKPDICSYNAIISGVFKEGLWKHAQDILHEMVDMGI 444 Query: 249 APDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVK 70 PDL TFRVLLAGYCK RRF EAKA V EMVN+G++QL EDPLSKAF +L P ++ Sbjct: 445 KPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPLSKAFMVLELDPLAIR 504 Query: 69 VKRDNDAGLSKAEFFDTLGNGFY 1 VKRDND G SK EFFD LGNG Y Sbjct: 505 VKRDNDVGFSKTEFFDNLGNGLY 527 >ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like [Vitis vinifera] Length = 1273 Score = 194 bits (494), Expect = 5e-48 Identities = 96/143 (67%), Positives = 112/143 (78%) Frame = -1 Query: 429 ISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGP 250 IS +EGKLK+AFIYLSE+LSR LKPDI YNA++SGVF +G+WKHA +I HEM++ G Sbjct: 402 ISWCCREGKLKNAFIYLSEILSRDLKPDICSYNAIISGVFKEGLWKHAQDILHEMVDMGI 461 Query: 249 APDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVK 70 PDL TFRVLLAGYCK RRF EAKA V EMVN+G++QL EDPLSKAF +L P ++ Sbjct: 462 KPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPLSKAFMVLELDPLAIR 521 Query: 69 VKRDNDAGLSKAEFFDTLGNGFY 1 VKRDND G SK EFFD LGNG Y Sbjct: 522 VKRDNDVGFSKTEFFDNLGNGLY 544 >ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like [Cucumis sativus] Length = 1225 Score = 175 bits (443), Expect = 4e-42 Identities = 85/140 (60%), Positives = 106/140 (75%) Frame = -1 Query: 420 SSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGPAPD 241 S EG L+ AFIY+SELLS LKPD+H YNAL+SG+F KG+W++A I EM++ G P+ Sbjct: 376 SCHEGNLRQAFIYMSELLSSGLKPDLHSYNALISGMFKKGLWENAQGILAEMVDQGIEPN 435 Query: 240 LSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVKVKR 61 LSTFR+LLAGYCK R+F EAK IV+EM G ++LS V+D L K F LGF S V++KR Sbjct: 436 LSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVDDQLCKIFSFLGFSESSVRLKR 495 Query: 60 DNDAGLSKAEFFDTLGNGFY 1 DN+ G+SK EFFDTLGNG Y Sbjct: 496 DNNTGVSKTEFFDTLGNGLY 515 >ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like [Cucumis sativus] Length = 1246 Score = 175 bits (443), Expect = 4e-42 Identities = 85/140 (60%), Positives = 106/140 (75%) Frame = -1 Query: 420 SSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGPAPD 241 S EG L+ AFIY+SELLS LKPD+H YNAL+SG+F KG+W++A I EM++ G P+ Sbjct: 376 SCHEGNLRQAFIYMSELLSSGLKPDLHSYNALISGMFKKGLWENAQGILAEMVDQGIEPN 435 Query: 240 LSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVKVKR 61 LSTFR+LLAGYCK R+F EAK IV+EM G ++LS V+D L K F LGF S V++KR Sbjct: 436 LSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVDDQLCKIFSFLGFSESSVRLKR 495 Query: 60 DNDAGLSKAEFFDTLGNGFY 1 DN+ G+SK EFFDTLGNG Y Sbjct: 496 DNNTGVSKTEFFDTLGNGLY 515 >ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1| predicted protein [Populus trichocarpa] Length = 1158 Score = 171 bits (434), Expect = 4e-41 Identities = 82/138 (59%), Positives = 105/138 (76%) Frame = -1 Query: 414 KEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEMLENGPAPDLS 235 +E KL AF YLSELLSR LKP+I CY+AL+S +F +GMW+HA +I EM++ G AP LS Sbjct: 292 RERKLSGAFNYLSELLSRGLKPNIWCYHALISALFKEGMWEHAQDILDEMVDMGTAPVLS 351 Query: 234 TFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFKPSMVKVKRDN 55 TF++LLAGYC+ RRF+E K ++ EMVN G+++ S +EDPLSKAF +L K V++KRDN Sbjct: 352 TFKILLAGYCRARRFDEVKVVIHEMVNRGLIESSALEDPLSKAFMVLELKTLSVRLKRDN 411 Query: 54 DAGLSKAEFFDTLGNGFY 1 D SK EFFD LGNG Y Sbjct: 412 DVEFSKTEFFDNLGNGLY 429