BLASTX nr result
ID: Coptis25_contig00035060
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035060 (323 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4... 111 5e-23 ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4... 106 2e-21 ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ... 105 3e-21 ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2... 100 9e-20 ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4... 100 2e-19 >ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera] Length = 809 Score = 111 bits (278), Expect = 5e-23 Identities = 63/109 (57%), Positives = 74/109 (67%), Gaps = 3/109 (2%) Frame = -3 Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACF 142 LGLTVCPKTRQ L HT+LIPNYTVKALIANWCE+NNV DPVKS+NLNQSS L ++A Sbjct: 272 LGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKLPDPVKSLNLNQSSPLLAHAEP 331 Query: 141 G-PSGSHILP--RQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSH 4 G P +H +P R + P + R T S N++SS G SPSH Sbjct: 332 GAPRDAHNVPHSRASQPMS-PESTRFTGSPGNNLVSSGGIHREGTSPSH 379 >ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max] Length = 841 Score = 106 bits (265), Expect = 2e-21 Identities = 61/111 (54%), Positives = 68/111 (61%), Gaps = 5/111 (4%) Frame = -3 Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACF 142 LGLTVCPKTRQ LVHTHLIPNYTVKALIANWCE+NNV DP KS NLNQ+S L Y Sbjct: 275 LGLTVCPKTRQTLVHTHLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQASVLHGYMES 334 Query: 141 G-----PSGSHILPRQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSH 4 G P +H R N P + + + S N L+S GT SP H Sbjct: 335 GTTRESPVFAH--SRSNQPSSPESARSCSFSSPANNLTSGGTQREGTSPLH 383 >ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 799 Score = 105 bits (263), Expect = 3e-21 Identities = 60/97 (61%), Positives = 67/97 (69%), Gaps = 2/97 (2%) Frame = -3 Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACF 142 LGLTVCPKTRQ L HT+LIPNYTVKALIANWCE+NNV DPVKS++ NQ SAL +A Sbjct: 234 LGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKLPDPVKSVSFNQPSALLIHAES 293 Query: 141 G-PSGSH-ILPRQNHPFARTNHVRSTSSLHENVLSSS 37 G P GSH R N P + RST S N +SSS Sbjct: 294 GTPRGSHGFYSRGNQPMS-PESTRSTDSPDRNWISSS 329 >ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1| predicted protein [Populus trichocarpa] Length = 698 Score = 100 bits (250), Expect = 9e-20 Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 3/97 (3%) Frame = -3 Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYA-C 145 LGLTVCPKTRQ L HT+LIPNYTVKALIANWCE+NNV DP+KSM+ NQ S L + Sbjct: 272 LGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKLPDPIKSMSFNQPSPLLVHVES 331 Query: 144 FGPSGSHILP--RQNHPFARTNHVRSTSSLHENVLSS 40 SH+LP R+N P + ++ RS S +++SS Sbjct: 332 IASRDSHVLPHLRENQPLSPESN-RSAGSPGRSMISS 367 >ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max] Length = 838 Score = 99.8 bits (247), Expect = 2e-19 Identities = 57/109 (52%), Positives = 65/109 (59%), Gaps = 3/109 (2%) Frame = -3 Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACF 142 LGLTVC KTRQ LVHT+LIPNYTVKALIANWCE+NNV DP KS NLNQ+ L Y Sbjct: 272 LGLTVCAKTRQTLVHTNLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQACVLHGYMES 331 Query: 141 G---PSGSHILPRQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSH 4 G S + R N P + + + S N L+S GT SP H Sbjct: 332 GTTRESPVFVHSRSNQPSSPESAGSRSFSSPANNLTSGGTQREGTSPLH 380