BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035060
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...   111   5e-23
ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4...   106   2e-21
ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...   105   3e-21
ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4...   100   2e-19

>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score =  111 bits (278), Expect = 5e-23
 Identities = 63/109 (57%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
 Frame = -3

Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACF 142
           LGLTVCPKTRQ L HT+LIPNYTVKALIANWCE+NNV   DPVKS+NLNQSS L ++A  
Sbjct: 272 LGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKLPDPVKSLNLNQSSPLLAHAEP 331

Query: 141 G-PSGSHILP--RQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSH 4
           G P  +H +P  R + P +     R T S   N++SS G      SPSH
Sbjct: 332 GAPRDAHNVPHSRASQPMS-PESTRFTGSPGNNLVSSGGIHREGTSPSH 379


>ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 841

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/111 (54%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
 Frame = -3

Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACF 142
           LGLTVCPKTRQ LVHTHLIPNYTVKALIANWCE+NNV   DP KS NLNQ+S L  Y   
Sbjct: 275 LGLTVCPKTRQTLVHTHLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQASVLHGYMES 334

Query: 141 G-----PSGSHILPRQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSH 4
           G     P  +H   R N P +  +    + S   N L+S GT     SP H
Sbjct: 335 GTTRESPVFAH--SRSNQPSSPESARSCSFSSPANNLTSGGTQREGTSPLH 383


>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 799

 Score =  105 bits (263), Expect = 3e-21
 Identities = 60/97 (61%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
 Frame = -3

Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACF 142
           LGLTVCPKTRQ L HT+LIPNYTVKALIANWCE+NNV   DPVKS++ NQ SAL  +A  
Sbjct: 234 LGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKLPDPVKSVSFNQPSALLIHAES 293

Query: 141 G-PSGSH-ILPRQNHPFARTNHVRSTSSLHENVLSSS 37
           G P GSH    R N P +     RST S   N +SSS
Sbjct: 294 GTPRGSHGFYSRGNQPMS-PESTRSTDSPDRNWISSS 329


>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score =  100 bits (250), Expect = 9e-20
 Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
 Frame = -3

Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYA-C 145
           LGLTVCPKTRQ L HT+LIPNYTVKALIANWCE+NNV   DP+KSM+ NQ S L  +   
Sbjct: 272 LGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKLPDPIKSMSFNQPSPLLVHVES 331

Query: 144 FGPSGSHILP--RQNHPFARTNHVRSTSSLHENVLSS 40
                SH+LP  R+N P +  ++ RS  S   +++SS
Sbjct: 332 IASRDSHVLPHLRENQPLSPESN-RSAGSPGRSMISS 367


>ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 838

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/109 (52%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = -3

Query: 321 LGLTVCPKTRQILVHTHLIPNYTVKALIANWCETNNVNTHDPVKSMNLNQSSALSSYACF 142
           LGLTVC KTRQ LVHT+LIPNYTVKALIANWCE+NNV   DP KS NLNQ+  L  Y   
Sbjct: 272 LGLTVCAKTRQTLVHTNLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQACVLHGYMES 331

Query: 141 G---PSGSHILPRQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSH 4
           G    S   +  R N P +  +    + S   N L+S GT     SP H
Sbjct: 332 GTTRESPVFVHSRSNQPSSPESAGSRSFSSPANNLTSGGTQREGTSPLH 380