BLASTX nr result

ID: Coptis25_contig00035049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035049
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|2...    88   9e-16
ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|2...    80   3e-13
emb|CAN74920.1| hypothetical protein VITISV_022026 [Vitis vinifera]    74   2e-11
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]    73   4e-11
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]    71   2e-10

>ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|222839595|gb|EEE77932.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 39/122 (31%), Positives = 77/122 (63%)
 Frame = -1

Query: 590 HFAQQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQPVHNRELVTNIMRG 411
           HF+Q+S A+A N++ QL  L++GTQ+V  Y++ AK+++D+L +I +PV + +LV   + G
Sbjct: 112 HFSQKSVASATNLKMQLLDLNKGTQSVDTYLRHAKSIADALISINKPVPDEDLVIATLHG 171

Query: 410 LGSEFHTIVTTILNGGELPEYEDLRALLLTYETQITHSTPTSTPAAFLSYNPSTAALQPH 231
           LG ++  + T +     LP++ +LRA +L+++ Q +    + T  A  +++ + +  + H
Sbjct: 172 LGPDYLMLRTVLTQNPPLPDFTELRARILSFDAQQSRPADSPTAIALFNHHQTPSTRRDH 231

Query: 230 PP 225
            P
Sbjct: 232 RP 233


>ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|222871275|gb|EEF08406.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/119 (31%), Positives = 72/119 (60%)
 Frame = -1

Query: 581 QQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQPVHNRELVTNIMRGLGS 402
           Q S A+A N++ QL  L++GTQ+V  Y++ AK+++D+L +I +PV + +LV   + GLG 
Sbjct: 79  QISVASATNLKMQLLDLNKGTQSVDTYLRHAKSIADALISINKPVPDEDLVIATLHGLGP 138

Query: 401 EFHTIVTTILNGGELPEYEDLRALLLTYETQITHSTPTSTPAAFLSYNPSTAALQPHPP 225
            +  + T +     LP++ +LRA +L+++ Q +    + T  A  +++ + +  + H P
Sbjct: 139 NYLMLRTVLTQNPPLPDFTELRARILSFDAQQSRPADSPTAIALFNHHQTPSTRRDHRP 197


>emb|CAN74920.1| hypothetical protein VITISV_022026 [Vitis vinifera]
          Length = 620

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
 Frame = -1

Query: 569 ANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQPVHNRELVTNIMRGLGSEFHT 390
           AN   +  +  +  +G   + +Y+ + KT+SD+LAAIG+PV   + +  ++ GLGSE+++
Sbjct: 76  ANGILLHLEFQTAKKGVDPMLEYILKIKTISDNLAAIGEPVKETDHILQLLGGLGSEYNS 135

Query: 389 IVTTILNGGELPEYEDLRALLLTYETQITHSTPTST----PAAFLSYNPSTAALQPHPP 225
           IV ++    +      +  +LLTYE ++ H   +ST     AA ++  PST  L+PH P
Sbjct: 136 IVASLTTREDDLSLYYVHNILLTYEQRLNHQHTSSTDLPFAAAHIAAAPSTQHLRPHQP 194


>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
          Length = 515

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 9/190 (4%)
 Frame = -1

Query: 587 FAQQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQPVHNRELVTNIMRGL 408
           F+  S A    +R +  +  +G  ++  Y+ + KT+SD+LAA+G+PV +R+ +  ++ GL
Sbjct: 94  FSASSKARIMQLRLEFQTTKKGGDSMLDYILKMKTISDNLAAVGEPVKDRDHILQLLGGL 153

Query: 407 GSEFHTIVTTILNGGELPEYEDLRALLLTYETQ--ITHSTPTSTP--AAFLSYNPSTAAL 240
           G ++++IV ++    +      +  +LLT+E +  + HS+PT  P  +A +   PS    
Sbjct: 154 GPDYNSIVASLTAREDDLSLHSVHNILLTHEQRLHLQHSSPTDLPFASAHMPSIPSRQPS 213

Query: 239 QPHPP-----XXXXXXXXXXXXXXXXQRGHNXXXXXXXXXXYCPPGPGILGAYPVICQHC 75
           +PH P                      R H                P  L  +P  CQ C
Sbjct: 214 RPHQPRHYHHPSRPQHQVSSSSNRPPTRFHPQQPRNHHPIPSAHNKPHHLSTHPQ-CQLC 272

Query: 74  GQPGHTTPAC 45
           G+ GHT   C
Sbjct: 273 GKFGHTVIKC 282


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 9/190 (4%)
 Frame = -1

Query: 587 FAQQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQPVHNRELVTNIMRGL 408
           F+  S A    +R +  +  +G   +  Y+ + KT+SD+LAA+G+PV  R+ +  ++ GL
Sbjct: 122 FSASSKARIMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGL 181

Query: 407 GSEFHTIVTTILNGGELPEYEDLRALLLTYETQ--ITHSTPT--STPAAFLSYNPSTAAL 240
           G ++++IV ++    +      + ++LLT+E +  + HS+PT  S  +A ++  PS    
Sbjct: 182 GPDYNSIVASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMASXPSRQPN 241

Query: 239 QPHPP-----XXXXXXXXXXXXXXXXQRGHNXXXXXXXXXXYCPPGPGILGAYPVICQHC 75
           +PH P                      R H                P  L   P  CQ C
Sbjct: 242 RPHQPRHYHHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQ-CQLC 300

Query: 74  GQPGHTTPAC 45
           G+ GHT   C
Sbjct: 301 GKFGHTAIKC 310