BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035023
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glyc...   179   2e-43
ref|XP_003594881.1| Polygalacturonase QRT3 [Medicago truncatula]...   173   1e-41
ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002447084.1| hypothetical protein SORBIDRAFT_06g028280 [S...   169   3e-40
ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40

>ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glycine max]
          Length = 472

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/117 (70%), Positives = 101/117 (86%)
 Frame = +2

Query: 2   LQLPASGGGNLVIHGGSLRASNDFATDRYLIELSATSDGNKALPQYTYEDITLRDLMLDP 181
           L+LP +G GNL+IHGG++RAS++F  D Y+I+LS +S+G  +LP Y +E ITL++L+LD 
Sbjct: 123 LKLPVAGVGNLMIHGGTIRASDNFPEDGYIIDLSPSSNGRNSLPSYNFEFITLKELLLDS 182

Query: 182 NYRGGGISVINSLRTSIDNCYITHFATNGILVQGGHETYIHNSFLGQHITAGGDPNE 352
           N+RGGGISVINSLRT+IDNCYITHF TNGILVQ GHETYI NSFLGQHITAGGD NE
Sbjct: 183 NFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNSFLGQHITAGGDKNE 239


>ref|XP_003594881.1| Polygalacturonase QRT3 [Medicago truncatula]
           gi|355483929|gb|AES65132.1| Polygalacturonase QRT3
           [Medicago truncatula]
          Length = 497

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/121 (71%), Positives = 99/121 (81%), Gaps = 4/121 (3%)
 Frame = +2

Query: 2   LQLPASGGGNLVIHGGSLRASNDFATDRYLIELSATS---DG-NKALPQYTYEDITLRDL 169
           L+LP SG GNL+IHGG+++ASNDF  D Y+I+LS +S   DG N     Y +E ITL+DL
Sbjct: 144 LKLPVSGVGNLMIHGGTIKASNDFPNDGYIIDLSTSSNENDGKNSPSSSYNFEYITLKDL 203

Query: 170 MLDPNYRGGGISVINSLRTSIDNCYITHFATNGILVQGGHETYIHNSFLGQHITAGGDPN 349
           +LD N+RGGGISVINSLRT+IDNCYITHF TNGILVQ GHETYI NSFLGQHITAGGD N
Sbjct: 204 LLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNSFLGQHITAGGDKN 263

Query: 350 E 352
           E
Sbjct: 264 E 264


>ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  170 bits (430), Expect = 1e-40
 Identities = 85/117 (72%), Positives = 97/117 (82%)
 Frame = +2

Query: 2   LQLPASGGGNLVIHGGSLRASNDFATDRYLIELSATSDGNKALPQYTYEDITLRDLMLDP 181
           L+LPA+G GNL+I GG+L AS+DF TD YLI+LSA+S  + +   Y YE IT++DLMLD 
Sbjct: 142 LRLPAAGVGNLMISGGTLTASDDFPTDGYLIDLSASSSSSSS--SYNYEYITIKDLMLDC 199

Query: 182 NYRGGGISVINSLRTSIDNCYITHFATNGILVQGGHETYIHNSFLGQHITAGGDPNE 352
           +YRGGGISVINSLRTSIDNCYI HF T GILVQ GHETYI NSFLGQHITAGGDP E
Sbjct: 200 SYRGGGISVINSLRTSIDNCYIAHFNTEGILVQDGHETYIRNSFLGQHITAGGDPGE 256


>ref|XP_002447084.1| hypothetical protein SORBIDRAFT_06g028280 [Sorghum bicolor]
           gi|241938267|gb|EES11412.1| hypothetical protein
           SORBIDRAFT_06g028280 [Sorghum bicolor]
          Length = 496

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/117 (68%), Positives = 95/117 (81%)
 Frame = +2

Query: 2   LQLPASGGGNLVIHGGSLRASNDFATDRYLIELSATSDGNKALPQYTYEDITLRDLMLDP 181
           L LPASGGGN  IH GSLRAS+DF TDRYLIELSAT  G      Y YE  TLRDLMLD 
Sbjct: 156 LTLPASGGGNFKIHSGSLRASDDFPTDRYLIELSATKSGRS----YDYEYATLRDLMLDC 211

Query: 182 NYRGGGISVINSLRTSIDNCYITHFATNGILVQGGHETYIHNSFLGQHITAGGDPNE 352
           +YRGGG++V++SLR +IDNCY+ HFA++G+ V+GGHET+I N+FLGQH+TAGGDP E
Sbjct: 212 SYRGGGVTVVDSLRVAIDNCYVAHFASDGVAVRGGHETFIRNTFLGQHMTAGGDPGE 268


>ref|XP_002335114.1| predicted protein [Populus trichocarpa]
           gi|224137804|ref|XP_002326444.1| predicted protein
           [Populus trichocarpa] gi|222832896|gb|EEE71373.1|
           predicted protein [Populus trichocarpa]
           gi|222833766|gb|EEE72243.1| predicted protein [Populus
           trichocarpa]
          Length = 496

 Score =  169 bits (427), Expect = 3e-40
 Identities = 84/117 (71%), Positives = 96/117 (82%)
 Frame = +2

Query: 2   LQLPASGGGNLVIHGGSLRASNDFATDRYLIELSATSDGNKALPQYTYEDITLRDLMLDP 181
           L+LPA+G GNL+I GG+L AS+DF TD YLI+LSA+S  + +   Y YE IT++DLMLD 
Sbjct: 150 LRLPAAGAGNLMISGGTLTASDDFPTDGYLIDLSASSSSSSS---YNYEYITIKDLMLDC 206

Query: 182 NYRGGGISVINSLRTSIDNCYITHFATNGILVQGGHETYIHNSFLGQHITAGGDPNE 352
            +RGGGISVINSLRTSIDNCYITHF T GI VQ GHETYI NSFLGQHITAGGDP E
Sbjct: 207 KFRGGGISVINSLRTSIDNCYITHFNTEGISVQNGHETYIRNSFLGQHITAGGDPGE 263