BLASTX nr result
ID: Coptis25_contig00035016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00035016
(914 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77007.1| hypothetical protein VITISV_036875 [Vitis vinifera] 439 e-121
ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261... 437 e-120
emb|CBI26899.3| unnamed protein product [Vitis vinifera] 432 e-119
ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778... 416 e-114
ref|XP_002315881.1| predicted protein [Populus trichocarpa] gi|2... 411 e-112
>emb|CAN77007.1| hypothetical protein VITISV_036875 [Vitis vinifera]
Length = 1066
Score = 439 bits (1128), Expect = e-121
Identities = 230/319 (72%), Positives = 251/319 (78%), Gaps = 15/319 (4%)
Frame = -1
Query: 914 IRYYISLGDQRIVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXX 735
IRYY+SLGDQRIVDKN+IIRPKAEFEVG+MTLGGLL LGYTVVVSYKR
Sbjct: 447 IRYYLSLGDQRIVDKNYIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTSVSNGHLSM 506
Query: 734 XLEFIDSLGETFMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILESKGVPRLNTPPPL 555
E IDSLGETFMVLRGTDRK VGAE RM + GPWITKSYLE+ILE KGVPRLNTPP L
Sbjct: 507 SFETIDSLGETFMVLRGTDRKTVGAEVLRMGVNGPWITKSYLELILERKGVPRLNTPPLL 566
Query: 554 SSASIVGVQEKVIV-PKPIRVTSNLVSKLEDLSQPWTRSPTKSKVDPVVATWRFISAVTP 378
SS S QEKV+V PKPIR+T NLV++LEDLSQPWTRSPTKSK++PV+ATW FIS
Sbjct: 567 SSISPTSNQEKVVVAPKPIRITPNLVTRLEDLSQPWTRSPTKSKMEPVLATWHFISPDPL 626
Query: 377 HADNS--------------SVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKGLPVL 240
HAD+S S FRD ++LAPMPDSYDLDRG LENKGLPV+
Sbjct: 627 HADSSVTGLDFSHEATTDPSSFRDTLRLAPMPDSYDLDRGLLLSVQAIQALLENKGLPVI 686
Query: 239 VGIGGPSGSGKTSLAHKMANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLSLLSKNIDD 60
VGIGGPSGSGKTSLAHKMANIVGCEV+SLESYYKSEHVKDFK DDF S+DLSLLSKNIDD
Sbjct: 687 VGIGGPSGSGKTSLAHKMANIVGCEVVSLESYYKSEHVKDFKCDDFSSLDLSLLSKNIDD 746
Query: 59 IRNCQRTKVPIFDLENCTR 3
++N +RTKVPIFDLE R
Sbjct: 747 VKNRRRTKVPIFDLETGAR 765
Score = 62.8 bits (151), Expect = 1e-07
Identities = 40/101 (39%), Positives = 56/101 (55%)
Frame = -1
Query: 365 SSVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKGLPVLVGIGGPSGSGKTSLAHKM 186
SS ++Q P+ S+D G E K V VGIGGPSGSGK+SLA K+
Sbjct: 25 SSSSSSILQSLPLHVSFD--HGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKSSLAEKV 82
Query: 185 ANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLSLLSKNID 63
A+++GC V+S+E+Y + V D +D SID L N++
Sbjct: 83 ASVIGCTVVSMENY--RDGVDD--GNDLNSIDFDALVSNLE 119
>ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261233 [Vitis vinifera]
Length = 951
Score = 437 bits (1125), Expect = e-120
Identities = 231/323 (71%), Positives = 252/323 (78%), Gaps = 19/323 (5%)
Frame = -1
Query: 914 IRYYISLGDQRIVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXX 735
IRYY+SLGDQRIVDKN+IIRPKAEFEVG+MTLGGLL LGYTVVVSYKR
Sbjct: 278 IRYYLSLGDQRIVDKNYIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTSVSNGHLSM 337
Query: 734 XLEFIDSLGETFMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILESK----------- 588
E IDSLGETFMVLRGTDRK VGAE RM + GPWITKSYLE+ILE K
Sbjct: 338 SFETIDSLGETFMVLRGTDRKTVGAEVLRMGVNGPWITKSYLELILERKDFSHCSFQFVK 397
Query: 587 ---GVPRLNTPPPLSSASIVGVQEKVIV-PKPIRVTSNLVSKLEDLSQPWTRSPTKSKVD 420
GVPRLNTPP LSS S QEKV+V PKPIR+T NLV++LEDLSQPWTRSPTKSK++
Sbjct: 398 LVTGVPRLNTPPLLSSISPTSNQEKVVVAPKPIRITPNLVTRLEDLSQPWTRSPTKSKME 457
Query: 419 PVVATWRFISAVTPHADNS----SVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKG 252
PV+ATW FIS HAD+S S FRD ++LAPMPDSYDLDRG LENKG
Sbjct: 458 PVLATWHFISPDPLHADSSVTDPSSFRDTLRLAPMPDSYDLDRGLLLSVQAIQALLENKG 517
Query: 251 LPVLVGIGGPSGSGKTSLAHKMANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLSLLSK 72
LPV+VGIGGPSGSGKTSLAHKMANIVGCEV+SLESYYKSEHVKDFK DDF S+DLSLLSK
Sbjct: 518 LPVIVGIGGPSGSGKTSLAHKMANIVGCEVVSLESYYKSEHVKDFKCDDFSSLDLSLLSK 577
Query: 71 NIDDIRNCQRTKVPIFDLENCTR 3
NIDD++NC+RTKVPIFDLE R
Sbjct: 578 NIDDVKNCRRTKVPIFDLETGAR 600
Score = 75.1 bits (183), Expect = 2e-11
Identities = 46/121 (38%), Positives = 67/121 (55%)
Frame = -1
Query: 365 SSVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKGLPVLVGIGGPSGSGKTSLAHKM 186
SS ++Q P+ S+D G E K V VGIGGPSGSGK+SLA K+
Sbjct: 25 SSSSSSILQSLPLHVSFD--HGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKSSLAEKV 82
Query: 185 ANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLSLLSKNIDDIRNCQRTKVPIFDLENCT 6
A+++GC V+S+E+Y + V D +D SID L N++D+ + T +P+FD +
Sbjct: 83 ASVIGCTVVSMENY--RDGVDD--GNDLNSIDFDALVSNLEDLIRGKDTLIPVFDFQEKR 138
Query: 5 R 3
R
Sbjct: 139 R 139
Score = 56.6 bits (135), Expect = 8e-06
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Frame = -1
Query: 881 IVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXXXLEFIDSLGET 702
I + NFII+PK +F++ T+ GLL+LGY V + +D+L +
Sbjct: 771 IREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYIEASAFIYQDGK-------VDNLQDV 823
Query: 701 --FMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILES 591
++ ++G +++ V A S + + G + TKSYL++ILES
Sbjct: 824 SPYLQIKGVNKEAVAAAGSTLKLDGSYTTKSYLQIILES 862
>emb|CBI26899.3| unnamed protein product [Vitis vinifera]
Length = 981
Score = 432 bits (1110), Expect = e-119
Identities = 231/338 (68%), Positives = 252/338 (74%), Gaps = 34/338 (10%)
Frame = -1
Query: 914 IRYYISLGDQRIVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXX 735
IRYY+SLGDQRIVDKN+IIRPKAEFEVG+MTLGGLL LGYTVVVSYKR
Sbjct: 290 IRYYLSLGDQRIVDKNYIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTSVSNGHLSM 349
Query: 734 XLEFIDSLGETFMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILESKGVPRLNTPPPL 555
E IDSLGETFMVLRGTDRK VGAE RM + GPWITKSYLE+ILE KGVPRLNTPP L
Sbjct: 350 SFETIDSLGETFMVLRGTDRKTVGAEVLRMGVNGPWITKSYLELILERKGVPRLNTPPLL 409
Query: 554 SSASIVGVQEKVIV-PKPIRVTSNLVSKLEDLSQPWTRSPTKSKVDPVVATWRFISAVTP 378
SS S QEKV+V PKPIR+T NLV++LEDLSQPWTRSPTKSK++PV+ATW FIS
Sbjct: 410 SSISPTSNQEKVVVAPKPIRITPNLVTRLEDLSQPWTRSPTKSKMEPVLATWHFISPDPL 469
Query: 377 HADNS----SVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKGLPVLVGI------- 231
HAD+S S FRD ++LAPMPDSYDLDRG LENKGLPV+VGI
Sbjct: 470 HADSSVTDPSSFRDTLRLAPMPDSYDLDRGLLLSVQAIQALLENKGLPVIVGIGNMEINQ 529
Query: 230 ----------------------GGPSGSGKTSLAHKMANIVGCEVISLESYYKSEHVKDF 117
GGPSGSGKTSLAHKMANIVGCEV+SLESYYKSEHVKDF
Sbjct: 530 LFKFVITYFQFSGRVGSHPAIHGGPSGSGKTSLAHKMANIVGCEVVSLESYYKSEHVKDF 589
Query: 116 KYDDFGSIDLSLLSKNIDDIRNCQRTKVPIFDLENCTR 3
K DDF S+DLSLLSKNIDD++NC+RTKVPIFDLE R
Sbjct: 590 KCDDFSSLDLSLLSKNIDDVKNCRRTKVPIFDLETGAR 627
Score = 75.1 bits (183), Expect = 2e-11
Identities = 46/121 (38%), Positives = 67/121 (55%)
Frame = -1
Query: 365 SSVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKGLPVLVGIGGPSGSGKTSLAHKM 186
SS ++Q P+ S+D G E K V VGIGGPSGSGK+SLA K+
Sbjct: 25 SSSSSSILQSLPLHVSFD--HGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKSSLAEKV 82
Query: 185 ANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLSLLSKNIDDIRNCQRTKVPIFDLENCT 6
A+++GC V+S+E+Y + V D +D SID L N++D+ + T +P+FD +
Sbjct: 83 ASVIGCTVVSMENY--RDGVDD--GNDLNSIDFDALVSNLEDLIRGKDTLIPVFDFQEKR 138
Query: 5 R 3
R
Sbjct: 139 R 139
Score = 57.0 bits (136), Expect = 6e-06
Identities = 30/97 (30%), Positives = 54/97 (55%)
Frame = -1
Query: 881 IVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXXXLEFIDSLGET 702
I + NFII+PK +F++ T+ GLL+LGY V + ++ + +
Sbjct: 798 IREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYIEASAFIYQDGKILIEVDNLQDV-SP 856
Query: 701 FMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILES 591
++ ++G +++ V A S + + G + TKSYL++ILES
Sbjct: 857 YLQIKGVNKEAVAAAGSTLKLDGSYTTKSYLQIILES 893
>ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778905 [Glycine max]
Length = 945
Score = 416 bits (1068), Expect = e-114
Identities = 220/312 (70%), Positives = 245/312 (78%), Gaps = 8/312 (2%)
Frame = -1
Query: 914 IRYYISLGDQRIVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXX 735
IRYY+SLGDQRIVDKNFIIRPKAEFEVG+MTLGGLL LGY VVVSYKR
Sbjct: 284 IRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTVNNGKVSM 343
Query: 734 XLEFIDSLGETFMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILESKGVPRLNTPPPL 555
E ID LGETFMV+RGT+RK VG EA RM I GPWITKSYLEMILE KGVPRL+TPP +
Sbjct: 344 SFETIDVLGETFMVMRGTNRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLV 403
Query: 554 SSASIVGVQEKVI-VPKPIRVTSNLVSKLEDLSQPWTRSPTKSKVDPVVATWRFISAVTP 378
S+ ++ G QE VI PKPIRVT NLV+ L+DL QPWTRSPTKSK++PVVA W FIS+ +
Sbjct: 404 SNTTVPGSQETVIAAPKPIRVTPNLVTGLDDLPQPWTRSPTKSKMEPVVAEWHFISSDSS 463
Query: 377 HADNS-------SVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKGLPVLVGIGGPS 219
DNS S FRD ++LAPMPDS+DLDRG LENKG+PV+VGIGGPS
Sbjct: 464 LPDNSVLATTDPSSFRDSVRLAPMPDSFDLDRGLLLAVQAIQALLENKGVPVIVGIGGPS 523
Query: 218 GSGKTSLAHKMANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLSLLSKNIDDIRNCQRT 39
GSGKTSLAHKMANI+GCEV+SLESYYK VKDFKYDDF ++DLSLLSKNIDDIRN QRT
Sbjct: 524 GSGKTSLAHKMANIIGCEVVSLESYYK--QVKDFKYDDFSALDLSLLSKNIDDIRNGQRT 581
Query: 38 KVPIFDLENCTR 3
KVPIFDLE+ R
Sbjct: 582 KVPIFDLESGAR 593
Score = 74.3 bits (181), Expect = 4e-11
Identities = 46/121 (38%), Positives = 63/121 (52%)
Frame = -1
Query: 365 SSVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKGLPVLVGIGGPSGSGKTSLAHKM 186
SS ++Q P+ S+D G E K V VGIGGPSGSGKTSL K+
Sbjct: 25 SSSSSSILQSLPLHVSFD--HGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKV 82
Query: 185 ANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLSLLSKNIDDIRNCQRTKVPIFDLENCT 6
A+++GC VIS+E+Y + +D SID L KN++D+ T +P FD +
Sbjct: 83 ASVIGCTVISMENYRDGVD----EGNDVDSIDFDTLIKNLEDLTKGNDTSIPEFDYQQKR 138
Query: 5 R 3
R
Sbjct: 139 R 139
Score = 57.8 bits (138), Expect = 4e-06
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = -1
Query: 881 IVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXXXLEFIDSLGET 702
I + NFII+PK +F++G T+ GLL+LGY V + ++ + +
Sbjct: 764 IKEGNFIIQPKVDFDIGISTVAGLLNLGYQAVAYIE----ASAFIYQDGKVDHLQDVPGP 819
Query: 701 FMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILE 594
++ ++G ++ V A S + + G + TKSYLE+ILE
Sbjct: 820 YIQIKGVNKDAVAAAGSMLKLDGSYTTKSYLEIILE 855
>ref|XP_002315881.1| predicted protein [Populus trichocarpa] gi|222864921|gb|EEF02052.1|
predicted protein [Populus trichocarpa]
Length = 842
Score = 411 bits (1056), Expect = e-112
Identities = 214/305 (70%), Positives = 243/305 (79%), Gaps = 1/305 (0%)
Frame = -1
Query: 914 IRYYISLGDQRIVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXX 735
I+YY+SLGDQRIVDKNFIIRPKAEFEVG+MTLGGLL LGY VVVSYKR
Sbjct: 276 IKYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYNVVVSYKRASSSVSNGNLSL 335
Query: 734 XLEFIDSLGETFMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILESKGVPRLNTPPPL 555
LE ID+LGETF+VLRG +RK VGAEA+RM + GPWITKSYLEMIL+ KGVPRLNTPP L
Sbjct: 336 SLETIDTLGETFVVLRGMNRKTVGAEATRMGVNGPWITKSYLEMILQRKGVPRLNTPPLL 395
Query: 554 SSASIVGVQEKVIV-PKPIRVTSNLVSKLEDLSQPWTRSPTKSKVDPVVATWRFISAVTP 378
+ S+ QE+VIV P+PIR + NLV++LEDLSQPWTRSPTKSK++P+VATW FIS+ T
Sbjct: 396 PNTSMTSNQERVIVAPRPIRTSPNLVNRLEDLSQPWTRSPTKSKMEPIVATWHFISSDT- 454
Query: 377 HADNSSVFRDLMQLAPMPDSYDLDRGXXXXXXXXXXXLENKGLPVLVGIGGPSGSGKTSL 198
D M++APMPDSYDLDRG LENKG PV+VGIGGPSGSGKTSL
Sbjct: 455 ---------DNMKIAPMPDSYDLDRGLLLAVQAIQALLENKGPPVIVGIGGPSGSGKTSL 505
Query: 197 AHKMANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLSLLSKNIDDIRNCQRTKVPIFDL 18
AHKMANIVGCEV+SLESY+KSE VKDFKYDDF S+DLSLLSKNI +IRN +RTKVP+FDL
Sbjct: 506 AHKMANIVGCEVVSLESYFKSEQVKDFKYDDFSSLDLSLLSKNIGNIRNGRRTKVPMFDL 565
Query: 17 ENCTR 3
E R
Sbjct: 566 ETGAR 570
Score = 60.5 bits (145), Expect = 5e-07
Identities = 29/96 (30%), Positives = 52/96 (54%)
Frame = -1
Query: 881 IVDKNFIIRPKAEFEVGKMTLGGLLHLGYTVVVSYKRXXXXXXXXXXXXXLEFIDSLGET 702
I + NFII+PK +F++ T+ GLL+LGY V + ++ +
Sbjct: 717 IREGNFIIQPKVDFDISTSTVAGLLNLGYQAVACIEASAYIYQDGKILIEVDHLQDTPSP 776
Query: 701 FMVLRGTDRKVVGAEASRMDIKGPWITKSYLEMILE 594
++ ++G +++ V A S + + G + TKSYL++ILE
Sbjct: 777 YLQIKGVNKEAVAAAGSTLKLDGSYTTKSYLQIILE 812
Score = 59.3 bits (142), Expect = 1e-06
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 16/103 (15%)
Frame = -1
Query: 263 ENKGLPVLVGIGGPSGSGKTSLAHKMANIVGCEVISLESYYKSEHVKDFKYDDFGSIDLS 84
E K V VGIGGPSGSGKTSLA K+A+++GC VIS+E+Y + D SID
Sbjct: 21 EKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCVVISMENY----RMGFDDGSDLDSIDFD 76
Query: 83 LLSKNID----------------DIRNCQRTKVPIFDLENCTR 3
L +N++ D+ + T P+FD + R
Sbjct: 77 ALIQNLELCQCVLYKFGFVYLYTDLTKGKDTLTPMFDYQQKRR 119