BLASTX nr result

ID: Coptis25_contig00034986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034986
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272761.1| PREDICTED: G-box-binding factor 1 [Vitis vin...    99   5e-19
ref|XP_002283244.1| PREDICTED: G-box-binding factor 1 [Vitis vin...    94   1e-17
ref|XP_003517243.1| PREDICTED: G-box-binding factor 1-like [Glyc...    85   5e-15
ref|XP_002525106.1| G-box-binding factor, putative [Ricinus comm...    78   6e-13
ref|XP_004143501.1| PREDICTED: G-box-binding factor 1-like [Cucu...    78   8e-13

>ref|XP_002272761.1| PREDICTED: G-box-binding factor 1 [Vitis vinifera]
           gi|297735196|emb|CBI17558.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 59/108 (54%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
 Frame = -2

Query: 324 SGIEPSFSERGQAASSIPAFKPGNPEFDLHRASPAGA-LLNTRPYASGVSQPVTPVTMVG 148
           SG     S  G+   S+PA    N   DL  ASP G+     RP  SG+S  V P  MVG
Sbjct: 194 SGTSVQASVPGKPVISMPATNL-NIGMDLWSASPGGSGATKLRPNPSGISSSVAPAAMVG 252

Query: 147 CEGVVSGQWILDEHELKRQRRMQSNRESARRSRLKKQAEGEDLQTKVK 4
            EGV+  QWI DE ELKRQ+R QSNRESARRSRL+KQAE E+LQ KV+
Sbjct: 253 REGVMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQAKVE 300


>ref|XP_002283244.1| PREDICTED: G-box-binding factor 1 [Vitis vinifera]
           gi|302142457|emb|CBI19660.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = -2

Query: 255 NPEFDLHRASPAGAL-LNTRPYASGVSQPVTPVTMVGCEGVVSG-QWILDEHELKRQRRM 82
           N   DL  ASPAG   + TRP +SG S  V   T+VG EG++   QWI DE ELKRQRR 
Sbjct: 222 NIGMDLWNASPAGGTPMKTRPQSSGASPQVASATIVGREGMLQDHQWIQDERELKRQRRK 281

Query: 81  QSNRESARRSRLKKQAEGEDLQTKVK 4
           QSNRESARRSRL+KQAE E+LQ+KV+
Sbjct: 282 QSNRESARRSRLRKQAECEELQSKVE 307


>ref|XP_003517243.1| PREDICTED: G-box-binding factor 1-like [Glycine max]
          Length = 349

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 54/111 (48%), Positives = 68/111 (61%), Gaps = 13/111 (11%)
 Frame = -2

Query: 297 RGQAASSIP-AFKPGNPE-----------FDLHRASPAGA-LLNTRPYASGVSQPVTPVT 157
           R  + S+IP +  PGNP             DL  ASPAGA     R   S  S+ VTP T
Sbjct: 192 RKNSVSTIPHSSVPGNPAVSMSPTSLNIGMDLWDASPAGAEAAKMRHNQSSASEAVTPPT 251

Query: 156 MVGCEGVVSGQWILDEHELKRQRRMQSNRESARRSRLKKQAEGEDLQTKVK 4
           ++G E  +  QWI D+ ELK+Q+R QSNRESARRSRL+KQAE E+LQ +V+
Sbjct: 252 IMGREVPLGEQWIQDDRELKKQKRKQSNRESARRSRLRKQAECEELQKRVE 302


>ref|XP_002525106.1| G-box-binding factor, putative [Ricinus communis]
           gi|223535565|gb|EEF37233.1| G-box-binding factor,
           putative [Ricinus communis]
          Length = 350

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 51/99 (51%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
 Frame = -2

Query: 294 GQAASSIPAFKPGNPEFDLHRASPAGA--LLNTRPYASGVSQPVTPVTMVGCEGVVSGQW 121
           G+   S+PA    N   DL  ASPA A      RP ASG S  + P  M         QW
Sbjct: 196 GKPVVSMPATNL-NIGMDLWNASPAAAPGATKIRPNASGGSSGIVPAIM-------PEQW 247

Query: 120 ILDEHELKRQRRMQSNRESARRSRLKKQAEGEDLQTKVK 4
           I DE ELKRQ+R QSNRESARRSRL+KQAE E+LQ +V+
Sbjct: 248 IQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVE 286


>ref|XP_004143501.1| PREDICTED: G-box-binding factor 1-like [Cucumis sativus]
           gi|449530949|ref|XP_004172454.1| PREDICTED:
           G-box-binding factor 1-like [Cucumis sativus]
          Length = 377

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 46/100 (46%), Positives = 63/100 (63%)
 Frame = -2

Query: 303 SERGQAASSIPAFKPGNPEFDLHRASPAGALLNTRPYASGVSQPVTPVTMVGCEGVVSGQ 124
           S  G+  ++IP     N   DL   + AG+    +   + VS  +  V MVG +G++  Q
Sbjct: 216 SVTGKPIANIPGTNL-NMGMDLWNTTNAGSGAG-KVRGNAVSSAIVTVPMVGRDGMMPEQ 273

Query: 123 WILDEHELKRQRRMQSNRESARRSRLKKQAEGEDLQTKVK 4
           W+ DE ELKRQ+R QSNRESARRSRL+KQAE E+LQ +V+
Sbjct: 274 WVQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQ 313


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