BLASTX nr result

ID: Coptis25_contig00034976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034976
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271384.1| PREDICTED: vacuolar protein sorting-associat...   157   1e-36
ref|XP_002517993.1| vacuolar membrane protein pep3, putative [Ri...   155   4e-36
ref|XP_003543356.1| PREDICTED: vacuolar protein sorting-associat...   150   1e-34
ref|XP_003628680.1| Vacuolar protein sorting-associated protein-...   146   2e-33
gb|AAF79641.1|AC025416_15 F5O11.22 [Arabidopsis thaliana]             145   4e-33

>ref|XP_002271384.1| PREDICTED: vacuolar protein sorting-associated protein 18 homolog
           [Vitis vinifera] gi|296084966|emb|CBI28381.3| unnamed
           protein product [Vitis vinifera]
          Length = 986

 Score =  157 bits (396), Expect = 1e-36
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = +1

Query: 91  MDKTRALFSVDLLERHAAKGRGVITCISTGNDVIVLGTSKGWLIRHDFGVGDSFDLELSS 270
           MD+ R +F+VDLLER+AAKGRG ITC++ GNDVIVLGTSKGW+IRHDFGVGDS+D++LS 
Sbjct: 1   MDQVRQVFTVDLLERYAAKGRGAITCMAAGNDVIVLGTSKGWIIRHDFGVGDSYDIDLSV 60

Query: 271 SRTGDQPVHTVFVDPGGSHCIATVLISGEAETYYTH 378
            RTG+Q +H  FVDPGGSHCIATV+ +G A+TYYTH
Sbjct: 61  GRTGEQSIHRAFVDPGGSHCIATVVGNGGADTYYTH 96


>ref|XP_002517993.1| vacuolar membrane protein pep3, putative [Ricinus communis]
           gi|223542975|gb|EEF44511.1| vacuolar membrane protein
           pep3, putative [Ricinus communis]
          Length = 987

 Score =  155 bits (391), Expect = 4e-36
 Identities = 70/96 (72%), Positives = 86/96 (89%)
 Frame = +1

Query: 91  MDKTRALFSVDLLERHAAKGRGVITCISTGNDVIVLGTSKGWLIRHDFGVGDSFDLELSS 270
           M++ R +F+VDLLER+AAKGRGVITC++ GNDVIV+GTSKGW+IRHDFGVGDS+D++LS+
Sbjct: 1   MEQGRQVFTVDLLERYAAKGRGVITCMAAGNDVIVIGTSKGWVIRHDFGVGDSYDIDLSA 60

Query: 271 SRTGDQPVHTVFVDPGGSHCIATVLISGEAETYYTH 378
            R G+Q +H VFVDPGGSHCIATV+  G AETYYTH
Sbjct: 61  GRGGEQCIHRVFVDPGGSHCIATVVGGGGAETYYTH 96


>ref|XP_003543356.1| PREDICTED: vacuolar protein sorting-associated protein 18 homolog
           [Glycine max]
          Length = 990

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/96 (71%), Positives = 84/96 (87%)
 Frame = +1

Query: 91  MDKTRALFSVDLLERHAAKGRGVITCISTGNDVIVLGTSKGWLIRHDFGVGDSFDLELSS 270
           MD+ R +F+VDLLER+AAKGRGVITC++ GNDVIV+GTSKGW+IRHDFGVG+S +++LS 
Sbjct: 1   MDQGRQVFTVDLLERYAAKGRGVITCMAAGNDVIVIGTSKGWVIRHDFGVGNSNEIDLSV 60

Query: 271 SRTGDQPVHTVFVDPGGSHCIATVLISGEAETYYTH 378
            R GDQ +H VFVDPGGSHCIATV+  G AET+YTH
Sbjct: 61  GRPGDQSIHRVFVDPGGSHCIATVVGPGGAETFYTH 96


>ref|XP_003628680.1| Vacuolar protein sorting-associated protein-like protein [Medicago
           truncatula] gi|355522702|gb|AET03156.1| Vacuolar protein
           sorting-associated protein-like protein [Medicago
           truncatula]
          Length = 1021

 Score =  146 bits (369), Expect = 2e-33
 Identities = 66/97 (68%), Positives = 81/97 (83%)
 Frame = +1

Query: 88  DMDKTRALFSVDLLERHAAKGRGVITCISTGNDVIVLGTSKGWLIRHDFGVGDSFDLELS 267
           +MD  R +F+VDLLER+AAKG GVITC++ GNDVIV+GTS+GW+IRHDFG GDS + +LS
Sbjct: 223 NMDHGRQVFTVDLLERYAAKGHGVITCMAAGNDVIVIGTSRGWVIRHDFGAGDSHEFDLS 282

Query: 268 SSRTGDQPVHTVFVDPGGSHCIATVLISGEAETYYTH 378
           + R GDQ +H VFVDPGG HCIATV+  G AET+YTH
Sbjct: 283 AGRPGDQSIHRVFVDPGGCHCIATVVGPGGAETFYTH 319



 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/99 (65%), Positives = 79/99 (79%), Gaps = 3/99 (3%)
 Frame = +1

Query: 91  MDKTRALFSVDLLERHAAKGRGVITCISTGNDVIVLGTSKGWLIRHDFGVGDSF---DLE 261
           MD  R +F+VDLLER+AAKG GVITC++ GNDVIV+GTS+GW+IRHDFG GDS      +
Sbjct: 1   MDHGRQVFTVDLLERYAAKGHGVITCMAAGNDVIVIGTSRGWVIRHDFGAGDSHGVRQFD 60

Query: 262 LSSSRTGDQPVHTVFVDPGGSHCIATVLISGEAETYYTH 378
           LS+ R GDQ +H VFVDPGG HCIATV+  G AET+YT+
Sbjct: 61  LSAGRPGDQSIHRVFVDPGGCHCIATVVGPGGAETFYTY 99


>gb|AAF79641.1|AC025416_15 F5O11.22 [Arabidopsis thaliana]
          Length = 1063

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/96 (69%), Positives = 81/96 (84%)
 Frame = +1

Query: 91  MDKTRALFSVDLLERHAAKGRGVITCISTGNDVIVLGTSKGWLIRHDFGVGDSFDLELSS 270
           MD+ R +FSVDLLER+A K RG+ITC++ GNDVIVLGTSKGW+IR+DFGVG S D++L+ 
Sbjct: 1   MDQGRQVFSVDLLERYATKNRGMITCMAAGNDVIVLGTSKGWIIRYDFGVGSSNDIDLAV 60

Query: 271 SRTGDQPVHTVFVDPGGSHCIATVLISGEAETYYTH 378
            RTG+Q +H VFVDPGGSHCIATV   G AET+YTH
Sbjct: 61  GRTGEQSIHKVFVDPGGSHCIATVTGVGGAETFYTH 96


Top