BLASTX nr result
ID: Coptis25_contig00034960
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034960 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516304.1| ATP-binding cassette transporter, putative [... 91 1e-16 ref|XP_002306254.1| white-brown-complex ABC transporter family [... 89 4e-16 ref|XP_003528053.1| PREDICTED: ABC transporter G family member 5... 82 4e-14 ref|XP_003630284.1| ABC transporter G family member [Medicago tr... 81 1e-13 ref|XP_003525127.1| PREDICTED: ABC transporter G family member 5... 79 4e-13 >ref|XP_002516304.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223544534|gb|EEF46051.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 600 Score = 90.9 bits (224), Expect = 1e-16 Identities = 56/108 (51%), Positives = 64/108 (59%), Gaps = 4/108 (3%) Frame = -3 Query: 313 VLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIETXXXXXXXXXXXXXXXXXXXXXXX 134 VLHHGT DQL V LR+ GLELPLH NV+EFAIE+IE Sbjct: 244 VLHHGTVDQLGVNLRNIGLELPLHFNVVEFAIESIEVIQQQQIKVVGQEVQLQVPSSTAQ 303 Query: 133 XXLTKVEE----KTGKFTLQQLFQQSKVVDEEITYVGGINRRYGFTNS 2 + K EE ++GKFTLQQLFQQSKVVDE+I V GI+ GF NS Sbjct: 304 LQIKKAEEVGESRSGKFTLQQLFQQSKVVDEDIIDV-GIDIPRGFANS 350 >ref|XP_002306254.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222855703|gb|EEE93250.1| white-brown-complex ABC transporter family [Populus trichocarpa] Length = 643 Score = 89.0 bits (219), Expect = 4e-16 Identities = 53/107 (49%), Positives = 63/107 (58%), Gaps = 3/107 (2%) Frame = -3 Query: 313 VLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIETXXXXXXXXXXXXXXXXXXXXXXX 134 VLHHGT DQL V LR+ G++LP+HVNV+EFA+E+IET Sbjct: 255 VLHHGTVDQLGVNLRTMGMQLPIHVNVVEFALESIETIQQQRKVLQQETQPQLLSSSTTK 314 Query: 133 XXLTKV---EEKTGKFTLQQLFQQSKVVDEEITYVGGINRRYGFTNS 2 KV E ++GKFTLQQLFQQSKVVDEEI V + GF NS Sbjct: 315 SRQKKVEVGESRSGKFTLQQLFQQSKVVDEEIINV-EFDFPLGFANS 360 >ref|XP_003528053.1| PREDICTED: ABC transporter G family member 5-like [Glycine max] Length = 690 Score = 82.0 bits (201), Expect = 4e-14 Identities = 50/104 (48%), Positives = 59/104 (56%) Frame = -3 Query: 313 VLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIETXXXXXXXXXXXXXXXXXXXXXXX 134 VLHHGT D + V LR GLELPLHVNV+EFAI++IET Sbjct: 327 VLHHGTVDLMGVNLRLMGLELPLHVNVVEFAIDSIETIQQQQKFQHG------------- 373 Query: 133 XXLTKVEEKTGKFTLQQLFQQSKVVDEEITYVGGINRRYGFTNS 2 E ++GKFTLQQLFQQSKV+D EI G++ GF NS Sbjct: 374 ------ESRSGKFTLQQLFQQSKVIDIEI-ISSGMDITCGFANS 410 >ref|XP_003630284.1| ABC transporter G family member [Medicago truncatula] gi|355524306|gb|AET04760.1| ABC transporter G family member [Medicago truncatula] Length = 641 Score = 80.9 bits (198), Expect = 1e-13 Identities = 50/110 (45%), Positives = 60/110 (54%), Gaps = 6/110 (5%) Frame = -3 Query: 313 VLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIETXXXXXXXXXXXXXXXXXXXXXXX 134 VLHHGT D L V LR GLELPLHVNV+EFAI++I+ Sbjct: 256 VLHHGTADLLSVNLRLMGLELPLHVNVVEFAIDSIDVIQQQQQWQVETETPRRLQGTTQQ 315 Query: 133 XXLTKVE----EKTGKFTLQQLFQQSKVVDEEITYV--GGINRRYGFTNS 2 E +K+GKFTLQQLFQQSKV+DE+I G++ Y F NS Sbjct: 316 KKGRDDEQQGDDKSGKFTLQQLFQQSKVIDEDIINKTGTGMDFSYDFANS 365 >ref|XP_003525127.1| PREDICTED: ABC transporter G family member 5-like [Glycine max] Length = 649 Score = 79.0 bits (193), Expect = 4e-13 Identities = 46/97 (47%), Positives = 52/97 (53%), Gaps = 4/97 (4%) Frame = -3 Query: 313 VLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIET----XXXXXXXXXXXXXXXXXXX 146 VLHHGT D L V LR GLELPLHVNV+EFAIE+I+T Sbjct: 260 VLHHGTADLLSVNLRLMGLELPLHVNVVEFAIESIDTIQQQQKCVPVQVETPRQLPGTIQ 319 Query: 145 XXXXXXLTKVEEKTGKFTLQQLFQQSKVVDEEITYVG 35 E + GK TLQQLFQQSKV+DE+ Y G Sbjct: 320 QKKGGDGEAGEGRNGKLTLQQLFQQSKVIDEQTMYAG 356