BLASTX nr result
ID: Coptis25_contig00034956
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034956 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302294.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus ... 65 7e-09 ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-li... 64 2e-08 emb|CBI19158.3| unnamed protein product [Vitis vinifera] 64 2e-08 gb|AFD04131.1| molecular zipper 1-like protein ZYP1, partial [Tr... 62 6e-08 >ref|XP_002302294.1| predicted protein [Populus trichocarpa] gi|222844020|gb|EEE81567.1| predicted protein [Populus trichocarpa] Length = 874 Score = 70.9 bits (172), Expect = 1e-10 Identities = 41/111 (36%), Positives = 58/111 (52%) Frame = -3 Query: 335 YKLVQQEKDLTLKHAQRQFDQLHDCFSRVTSENGAFRSENXXXXXXXXXXXXXXXVLMVQ 156 +KL QQE++L +KH QRQ+DQLHD V SE A + N +M Q Sbjct: 322 FKLAQQERELAVKHVQRQYDQLHDQSLSVKSERDAMKLVNQELNDKIIELQKSQESIMAQ 381 Query: 155 HAEECRLTEERIRNLESEIQVLIXXXXXXXXXXXXXXKNIEQLSETSSLSE 3 +EEC+ +ERI++LESE ++L+ + I+ LSE S SE Sbjct: 382 LSEECQSAKERIQSLESEAEMLMSKKKETEMLVSKLEEKIDTLSEGSRSSE 432 >ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus communis] gi|223547003|gb|EEF48500.1| Ribosome-binding protein, putative [Ricinus communis] Length = 868 Score = 64.7 bits (156), Expect = 7e-09 Identities = 39/111 (35%), Positives = 55/111 (49%) Frame = -3 Query: 335 YKLVQQEKDLTLKHAQRQFDQLHDCFSRVTSENGAFRSENXXXXXXXXXXXXXXXVLMVQ 156 +KL+Q E+DL KHAQ++F+QLHD F V SE A + N + Q Sbjct: 326 FKLIQLERDLIAKHAQKKFNQLHDKFLCVASEKDALQLVNQELNDKIIELQKAQDSIREQ 385 Query: 155 HAEECRLTEERIRNLESEIQVLIXXXXXXXXXXXXXXKNIEQLSETSSLSE 3 +E CRL +RI+ LESE ++L+ + I+ L E S SE Sbjct: 386 LSEGCRLAADRIQKLESEAEMLLSKKNETEILVSKLEETIDSLREHLSTSE 436 >ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-like [Vitis vinifera] Length = 868 Score = 63.5 bits (153), Expect = 2e-08 Identities = 33/84 (39%), Positives = 47/84 (55%) Frame = -3 Query: 338 WYKLVQQEKDLTLKHAQRQFDQLHDCFSRVTSENGAFRSENXXXXXXXXXXXXXXXVLMV 159 + KL QQE+DL KH+Q+Q+ QLH F + SE A + +N + Sbjct: 325 YVKLAQQERDLAAKHSQQQYAQLHRTFLCIASEKDALQLKNQVLNNKVVELQEAHNFVTA 384 Query: 158 QHAEECRLTEERIRNLESEIQVLI 87 Q AEECRL E+I+ LESE++ L+ Sbjct: 385 QLAEECRLAGEKIQTLESEVENLV 408 >emb|CBI19158.3| unnamed protein product [Vitis vinifera] Length = 876 Score = 63.5 bits (153), Expect = 2e-08 Identities = 33/84 (39%), Positives = 47/84 (55%) Frame = -3 Query: 338 WYKLVQQEKDLTLKHAQRQFDQLHDCFSRVTSENGAFRSENXXXXXXXXXXXXXXXVLMV 159 + KL QQE+DL KH+Q+Q+ QLH F + SE A + +N + Sbjct: 325 YVKLAQQERDLAAKHSQQQYAQLHRTFLCIASEKDALQLKNQVLNNKVVELQEAHNFVTA 384 Query: 158 QHAEECRLTEERIRNLESEIQVLI 87 Q AEECRL E+I+ LESE++ L+ Sbjct: 385 QLAEECRLAGEKIQTLESEVENLV 408 >gb|AFD04131.1| molecular zipper 1-like protein ZYP1, partial [Triticum aestivum] Length = 863 Score = 61.6 bits (148), Expect = 6e-08 Identities = 35/112 (31%), Positives = 56/112 (50%) Frame = -3 Query: 338 WYKLVQQEKDLTLKHAQRQFDQLHDCFSRVTSENGAFRSENXXXXXXXXXXXXXXXVLMV 159 +Y +VQ+EK L + A+ + + L + F +TSEN +SE +MV Sbjct: 325 YYGMVQEEKLLITRSAKDKLEHLQNQFVDLTSENSGLKSEIGELKSRITELQKTQEAVMV 384 Query: 158 QHAEECRLTEERIRNLESEIQVLIXXXXXXXXXXXXXXKNIEQLSETSSLSE 3 QH EEC++ E++IR LESE ++ +++L E SSL+E Sbjct: 385 QHVEECQVAEDKIRRLESEAEISASNVNCLEKLSSELQGRVQKLLEDSSLAE 436