BLASTX nr result
ID: Coptis25_contig00034906
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034906 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003526528.1| PREDICTED: rhamnogalacturonate lyase-like [G... 114 6e-24 ref|XP_004136250.1| PREDICTED: probable rhamnogalacturonate lyas... 114 1e-23 ref|XP_002527352.1| lyase, putative [Ricinus communis] gi|223533... 109 3e-22 ref|NP_172462.2| rhamnogalacturonate lyase-like protein [Arabido... 107 1e-21 ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas... 107 1e-21 >ref|XP_003526528.1| PREDICTED: rhamnogalacturonate lyase-like [Glycine max] Length = 636 Score = 114 bits (286), Expect = 6e-24 Identities = 51/71 (71%), Positives = 59/71 (83%) Frame = -3 Query: 215 GVQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEP 36 GVQL IQD HVVMDNG+VQVTLS P+GIVTGIRYNG++NLLE+ N E RGYWD+ W+ P Sbjct: 5 GVQLHIQDHHVVMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNKETNRGYWDLVWSAP 64 Query: 35 GMPGKFDIIKG 3 G G FD+IKG Sbjct: 65 GSKGMFDVIKG 75 >ref|XP_004136250.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis sativus] Length = 633 Score = 114 bits (284), Expect = 1e-23 Identities = 47/70 (67%), Positives = 61/70 (87%) Frame = -3 Query: 212 VQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEPG 33 V+LQI+D HVV+DNG++Q+TLSKP+GI+TG+RYNG++NLLE+ NPE RGYWD+ WN PG Sbjct: 6 VRLQIRDHHVVVDNGILQLTLSKPDGIITGVRYNGVDNLLEVLNPESNRGYWDLVWNSPG 65 Query: 32 MPGKFDIIKG 3 G FD+IKG Sbjct: 66 SKGVFDVIKG 75 >ref|XP_002527352.1| lyase, putative [Ricinus communis] gi|223533271|gb|EEF35024.1| lyase, putative [Ricinus communis] Length = 633 Score = 109 bits (272), Expect = 3e-22 Identities = 49/70 (70%), Positives = 59/70 (84%) Frame = -3 Query: 212 VQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEPG 33 V+L IQD+HVVM+NG+VQ+TLSKPEGIVTGIRY+GI+NLLE+ N E RGYWD+ WN PG Sbjct: 6 VRLHIQDRHVVMENGIVQITLSKPEGIVTGIRYSGIDNLLEILNRESNRGYWDLFWNPPG 65 Query: 32 MPGKFDIIKG 3 G FD+I G Sbjct: 66 GKGIFDVISG 75 >ref|NP_172462.2| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gi|332190392|gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] Length = 675 Score = 107 bits (266), Expect = 1e-21 Identities = 46/71 (64%), Positives = 58/71 (81%) Frame = -3 Query: 215 GVQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEP 36 GV L + D++VVMDNG++QVTLSKP GI+TGI YNGI+N+LE++N E RGYWD+ WNEP Sbjct: 48 GVHLHVHDRYVVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWNEP 107 Query: 35 GMPGKFDIIKG 3 G G FD+I G Sbjct: 108 GGKGIFDVISG 118 >ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1 [Vitis vinifera] Length = 643 Score = 107 bits (266), Expect = 1e-21 Identities = 49/71 (69%), Positives = 58/71 (81%) Frame = -3 Query: 215 GVQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEP 36 GVQL IQD+HVVMDNG++QVTLS P GIVTGIRY+ I+NLLE+ N E RGYWD+ W+ P Sbjct: 5 GVQLYIQDRHVVMDNGILQVTLSNPGGIVTGIRYSAIDNLLEVLNDETNRGYWDLVWSVP 64 Query: 35 GMPGKFDIIKG 3 G G FD+IKG Sbjct: 65 GSAGIFDVIKG 75