BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034906
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526528.1| PREDICTED: rhamnogalacturonate lyase-like [G...   114   6e-24
ref|XP_004136250.1| PREDICTED: probable rhamnogalacturonate lyas...   114   1e-23
ref|XP_002527352.1| lyase, putative [Ricinus communis] gi|223533...   109   3e-22
ref|NP_172462.2| rhamnogalacturonate lyase-like protein [Arabido...   107   1e-21
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   107   1e-21

>ref|XP_003526528.1| PREDICTED: rhamnogalacturonate lyase-like [Glycine max]
          Length = 636

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/71 (71%), Positives = 59/71 (83%)
 Frame = -3

Query: 215 GVQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEP 36
           GVQL IQD HVVMDNG+VQVTLS P+GIVTGIRYNG++NLLE+ N E  RGYWD+ W+ P
Sbjct: 5   GVQLHIQDHHVVMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNKETNRGYWDLVWSAP 64

Query: 35  GMPGKFDIIKG 3
           G  G FD+IKG
Sbjct: 65  GSKGMFDVIKG 75


>ref|XP_004136250.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis
           sativus]
          Length = 633

 Score =  114 bits (284), Expect = 1e-23
 Identities = 47/70 (67%), Positives = 61/70 (87%)
 Frame = -3

Query: 212 VQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEPG 33
           V+LQI+D HVV+DNG++Q+TLSKP+GI+TG+RYNG++NLLE+ NPE  RGYWD+ WN PG
Sbjct: 6   VRLQIRDHHVVVDNGILQLTLSKPDGIITGVRYNGVDNLLEVLNPESNRGYWDLVWNSPG 65

Query: 32  MPGKFDIIKG 3
             G FD+IKG
Sbjct: 66  SKGVFDVIKG 75


>ref|XP_002527352.1| lyase, putative [Ricinus communis] gi|223533271|gb|EEF35024.1|
           lyase, putative [Ricinus communis]
          Length = 633

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/70 (70%), Positives = 59/70 (84%)
 Frame = -3

Query: 212 VQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEPG 33
           V+L IQD+HVVM+NG+VQ+TLSKPEGIVTGIRY+GI+NLLE+ N E  RGYWD+ WN PG
Sbjct: 6   VRLHIQDRHVVMENGIVQITLSKPEGIVTGIRYSGIDNLLEILNRESNRGYWDLFWNPPG 65

Query: 32  MPGKFDIIKG 3
             G FD+I G
Sbjct: 66  GKGIFDVISG 75


>ref|NP_172462.2| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]
           gi|332190392|gb|AEE28513.1| rhamnogalacturonate
           lyase-like protein [Arabidopsis thaliana]
          Length = 675

 Score =  107 bits (266), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 58/71 (81%)
 Frame = -3

Query: 215 GVQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEP 36
           GV L + D++VVMDNG++QVTLSKP GI+TGI YNGI+N+LE++N E  RGYWD+ WNEP
Sbjct: 48  GVHLHVHDRYVVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWNEP 107

Query: 35  GMPGKFDIIKG 3
           G  G FD+I G
Sbjct: 108 GGKGIFDVISG 118


>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
           [Vitis vinifera]
          Length = 643

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/71 (69%), Positives = 58/71 (81%)
 Frame = -3

Query: 215 GVQLQIQDQHVVMDNGLVQVTLSKPEGIVTGIRYNGINNLLEMQNPEDERGYWDISWNEP 36
           GVQL IQD+HVVMDNG++QVTLS P GIVTGIRY+ I+NLLE+ N E  RGYWD+ W+ P
Sbjct: 5   GVQLYIQDRHVVMDNGILQVTLSNPGGIVTGIRYSAIDNLLEVLNDETNRGYWDLVWSVP 64

Query: 35  GMPGKFDIIKG 3
           G  G FD+IKG
Sbjct: 65  GSAGIFDVIKG 75