BLASTX nr result

ID: Coptis25_contig00034880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034880
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002949444.1| hypothetical protein VOLCADRAFT_74239 [Volvo...    59   3e-07
ref|XP_001692081.1| alpha subunit of the SRP receptor [Chlamydom...    59   3e-07
dbj|BAK04340.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   7e-07
ref|XP_002439256.1| hypothetical protein SORBIDRAFT_09g003220 [S...    58   7e-07
ref|XP_001767352.1| predicted protein [Physcomitrella patens sub...    58   7e-07

>ref|XP_002949444.1| hypothetical protein VOLCADRAFT_74239 [Volvox carteri f.
           nagariensis] gi|300265271|gb|EFJ49463.1| hypothetical
           protein VOLCADRAFT_74239 [Volvox carteri f. nagariensis]
          Length = 642

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = -2

Query: 267 VGAALSMVYRSGAPVMFVGCGQSYIHPKKLNVSKTLSRL 151
           VGAALSMVY SGAPVMFVGCGQ+Y+  KKLNV   +  L
Sbjct: 602 VGAALSMVYTSGAPVMFVGCGQTYVDLKKLNVKSVVKSL 640


>ref|XP_001692081.1| alpha subunit of the SRP receptor [Chlamydomonas reinhardtii]
           gi|158278808|gb|EDP04571.1| alpha subunit of the SRP
           receptor [Chlamydomonas reinhardtii]
          Length = 687

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = -2

Query: 267 VGAALSMVYRSGAPVMFVGCGQSYIHPKKLNVSKTLSRL 151
           VGAALSMVY SGAPVMFVGCGQ+Y+  KKLNV   +  L
Sbjct: 647 VGAALSMVYTSGAPVMFVGCGQTYVDLKKLNVKSVVKSL 685


>dbj|BAK04340.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 606

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = -2

Query: 267 VGAALSMVYRSGAPVMFVGCGQSYIHPKKLNVSKTLSRL 151
           VGAALSMVY SGAPVMFVGCGQSY   KKLNV   ++ L
Sbjct: 566 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVNTL 604


>ref|XP_002439256.1| hypothetical protein SORBIDRAFT_09g003220 [Sorghum bicolor]
           gi|241944541|gb|EES17686.1| hypothetical protein
           SORBIDRAFT_09g003220 [Sorghum bicolor]
          Length = 588

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = -2

Query: 267 VGAALSMVYRSGAPVMFVGCGQSYIHPKKLNVSKTLSRL 151
           VGAALSMVY SGAPVMFVGCGQSY   KKLNV   ++ L
Sbjct: 548 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVNTL 586


>ref|XP_001767352.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162681416|gb|EDQ67843.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 591

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/39 (71%), Positives = 30/39 (76%)
 Frame = -2

Query: 267 VGAALSMVYRSGAPVMFVGCGQSYIHPKKLNVSKTLSRL 151
           VGAALSMVY SGAPVMFVGCGQ+Y   KKLNV   +  L
Sbjct: 551 VGAALSMVYTSGAPVMFVGCGQNYTDLKKLNVKSVMKSL 589


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