BLASTX nr result

ID: Coptis25_contig00034878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034878
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|2...   188   8e-46
ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002323227.1| predicted protein [Populus trichocarpa] gi|2...   181   8e-44
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm...   178   7e-43
emb|CBI32806.3| unnamed protein product [Vitis vinifera]              166   4e-39

>ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|222867860|gb|EEF04991.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  188 bits (477), Expect = 8e-46
 Identities = 105/215 (48%), Positives = 135/215 (62%), Gaps = 3/215 (1%)
 Frame = -1

Query: 639 DKWCSVVPDVIGGEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLELSRFFESMDD 466
           D+W S    + G EGTP+S+NPSVV  EEGLPSPPLDEGAF AT  TS+ELS+FF+ MDD
Sbjct: 238 DEWYSAANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDD 297

Query: 465 DGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRKRESVNKQT 289
           DGN RN GEF  N  + R+ + +NQ    +  Q P    + SK+NE Q MRK+E V K +
Sbjct: 298 DGNPRNNGEFIKNHVSRRRPSAENQNISKQKQQTPKGANMPSKDNESQQMRKQEDVVKAS 357

Query: 288 MIMNTDXXXXXXXXXXXXXXVMDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGETDQIKL 109
              N +              +   T L ++ D V +Q+   + QQDK K  D    Q+KL
Sbjct: 358 KPSNANSGPGRPLKQNVEQKMNQETVLIRKTDKVTSQRKPPTGQQDKLKSSDEVAVQMKL 417

Query: 108 EAAKRKLHKGYQQAEDAKKQRTIQLMEMHELPRQG 4
           EA KRKL + YQQAE AK+QRTIQ+ME+H+LP+QG
Sbjct: 418 EATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQG 452


>ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|222854850|gb|EEE92397.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  184 bits (466), Expect = 2e-44
 Identities = 101/215 (46%), Positives = 138/215 (64%), Gaps = 3/215 (1%)
 Frame = -1

Query: 639 DKWCSVVPDVIGGEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLELSRFFESMDD 466
           D+W S    + G EGTP+S+NPSVV  EEGLPSPPLDEGAF AT  TS+ELS+FF+ MDD
Sbjct: 244 DEWYSTANAIRGDEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDD 303

Query: 465 DGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRKRESVNKQT 289
           DGN RN GEF  N E+ ++ +++ Q F  +    PN   V SK+N+ Q MR++E++ K +
Sbjct: 304 DGNPRNGGEFIKNRESGQRPSVEKQNFAKQKQHTPNGANVLSKDNKSQQMRRQEAIVKAS 363

Query: 288 MIMNTDXXXXXXXXXXXXXXVMDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGETDQIKL 109
              N +              +     L ++ D + +Q+   + QQDK K  D    Q+KL
Sbjct: 364 KPSNANSGPGRPLMQNVEQKMNQEPQLIRKTDKITSQRKPPTGQQDKLKNSDEVDVQMKL 423

Query: 108 EAAKRKLHKGYQQAEDAKKQRTIQLMEMHELPRQG 4
           EA KRKL + YQQAE+AK+QRTIQ+ME+H+LP+QG
Sbjct: 424 EATKRKLQERYQQAENAKRQRTIQVMELHDLPKQG 458


>ref|XP_002323227.1| predicted protein [Populus trichocarpa] gi|222867857|gb|EEF04988.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  181 bits (460), Expect = 8e-44
 Identities = 105/221 (47%), Positives = 135/221 (61%), Gaps = 9/221 (4%)
 Frame = -1

Query: 639 DKWCSVVPDVIG------GEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLELSRF 484
           D+W S    + G       EGTP+S+NPSVV  EEGLPSPPLDEGAF AT  TS+ELS+F
Sbjct: 238 DEWYSAANVIRGRNLLASNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQF 297

Query: 483 FESMDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRKRE 307
           F+ MDDDGN RN GEF  N  + R+ + +NQ    +  Q P    + SK+NE Q MRK+E
Sbjct: 298 FDGMDDDGNPRNNGEFIKNHVSRRRPSAENQNISKQKQQTPKGANMPSKDNESQQMRKQE 357

Query: 306 SVNKQTMIMNTDXXXXXXXXXXXXXXVMDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGE 127
            V K +   N +              +   T L ++ D V +Q+   + QQDK K  D  
Sbjct: 358 DVVKASKPSNANSGPGRPLKQNVEQKMNQETVLIRKTDKVTSQRKPPTGQQDKLKSSDEV 417

Query: 126 TDQIKLEAAKRKLHKGYQQAEDAKKQRTIQLMEMHELPRQG 4
             Q+KLEA KRKL + YQQAE AK+QRTIQ+ME+H+LP+QG
Sbjct: 418 AVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQG 458


>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
           gi|223543547|gb|EEF45077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 473

 Score =  178 bits (452), Expect = 7e-43
 Identities = 96/216 (44%), Positives = 132/216 (61%), Gaps = 3/216 (1%)
 Frame = -1

Query: 639 DKWCSVVPDVIGGEGTPESMNPSVVEE--GLPSPPLDEGAFLATPTTSLELSRFFESMDD 466
           D+W S    + G EGTPES+NPSVV+E  GLPSPPLDE  F A   T +EL++FF+ MDD
Sbjct: 234 DEWYSTTKAIRGDEGTPESVNPSVVDEEDGLPSPPLDEAFFFAAQNTGIELAQFFDGMDD 293

Query: 465 DGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRKRESVNKQT 289
           DGN RN GEF  N EN RK++L+ +  P R    P+   V +K+N+    R++E++ K  
Sbjct: 294 DGNPRNSGEFIKNRENGRKSSLEQKNIPKRKEHTPSEANVVAKDNKSHQSRRQEAMRKPN 353

Query: 288 MIMNTDXXXXXXXXXXXXXXVMDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGETDQIKL 109
               T                 + + ++++ D +  Q+     QQDK KC D +  Q KL
Sbjct: 354 KPSTTVSGPGRPTKQSVEQKANNESKIQRKTDKLVTQRKLPGGQQDKFKCSDDDAVQKKL 413

Query: 108 EAAKRKLHKGYQQAEDAKKQRTIQLMEMHELPRQGL 1
           EA KRKL + YQQAE+AK+QRTIQ+ME+H+LP+Q L
Sbjct: 414 EATKRKLQERYQQAENAKRQRTIQVMELHDLPKQAL 449


>emb|CBI32806.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  166 bits (419), Expect = 4e-39
 Identities = 101/218 (46%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
 Frame = -1

Query: 639 DKWCSVVPDVIGGEGTPESMNPSVV-----EEGLPSPPLDEGAFLATPTTSLELSRFFES 475
           D+W +    +   EGTP+S+NPSVV     EEGLP PP+DE +FL T  TSLELS+FF+ 
Sbjct: 117 DEWVNATAAI--AEGTPDSVNPSVVDDDDDEEGLPFPPMDELSFLTTQPTSLELSQFFDG 174

Query: 474 MDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQPNHEVVGSKENERQDMRKRESVNK 295
           MDDDGN RN GEFN N EN RK  L+NQ    R  Q     +  + N R +         
Sbjct: 175 MDDDGNPRNNGEFNRNRENGRKPALENQNISKRKQQ-----LPDEANVRPNRPS------ 223

Query: 294 QTMIMNTDXXXXXXXXXXXXXXVMDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGETDQI 115
                NTD              V + T   Q+ D     +     QQDKSK  + +T Q+
Sbjct: 224 -----NTDSGPGRPPKPGVGQKVNNETKFLQKSDKPAIHRKPVVGQQDKSKSSEEDTIQV 278

Query: 114 KLEAAKRKLHKGYQQAEDAKKQRTIQLMEMHELPRQGL 1
           KLEAAKRKLH+ YQQAEDAK+QRTIQ+ME+ +LP+QGL
Sbjct: 279 KLEAAKRKLHERYQQAEDAKRQRTIQVMELQDLPKQGL 316


Top