BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034868
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
gb|ACU18704.1| unknown [Glycine max]                                  155   4e-36
ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ...   147   1e-33

>ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  185 bits (469), Expect = 4e-45
 Identities = 89/133 (66%), Positives = 105/133 (78%)
 Frame = +3

Query: 6   PDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLVDKLLKEHGRSDLALKL 185
           PD+VTYTAL+H YG A NWE AY LLMEML +GW PHFH Y+LVDKLL+EHGR DL+ KL
Sbjct: 348 PDSVTYTALVHAYGEARNWEVAYDLLMEMLGLGWIPHFHAYTLVDKLLREHGRIDLSNKL 407

Query: 186 EGKLDIQLLNKHCKAGQLEASYEKLSSMLERGFNLPVYARDAFIRAFQKAGKREIALDLL 365
           E KL+ Q+L+KHCKAGQLEA+YEKL SMLE+GF  P+Y RDAF  AFQK GK EIA +LL
Sbjct: 408 ERKLESQILHKHCKAGQLEAAYEKLRSMLEKGFYPPMYVRDAFEHAFQKYGKLEIARELL 467

Query: 366 KKVEHDVSQSTIE 404
           + ++     ST E
Sbjct: 468 ENMDKACEPSTTE 480


>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449484825|ref|XP_004156991.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 579

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/124 (62%), Positives = 97/124 (78%)
 Frame = +3

Query: 6   PDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLVDKLLKEHGRSDLALKL 185
           PD+VTY+ALIH YG   +W AAYGLL EML +G  PHFH YS+VDKL++EHG+ DL LKL
Sbjct: 443 PDHVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHFHVYSIVDKLMREHGQIDLCLKL 502

Query: 186 EGKLDIQLLNKHCKAGQLEASYEKLSSMLERGFNLPVYARDAFIRAFQKAGKREIALDLL 365
           E K + Q+L K CK GQLEA+YEK+ SMLE+G + P+Y RDAF  AFQK GK +IA +LL
Sbjct: 503 EMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIYVRDAFESAFQKKGKFKIARELL 562

Query: 366 KKVE 377
           +K++
Sbjct: 563 QKMD 566


>gb|ACU18704.1| unknown [Glycine max]
          Length = 367

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)
 Frame = +3

Query: 6   PDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLVDKLLKEHGRSDLALKL 185
           PD +TYTALIH +G   NW+ +Y LLMEML +GW PHFHT++LV+ LL+EHG+ DL +KL
Sbjct: 233 PDGLTYTALIHSHGEVRNWKVSYDLLMEMLGLGWIPHFHTFNLVESLLREHGQLDLCVKL 292

Query: 186 EGKLDIQLLNKHCKAGQLEASYEKLSSMLERGFNLPVYARDAFIRAFQKAGKREIALDLL 365
           E KL+ Q L K CK G+L+A+YEK  SMLE+G  L  YARD F + FQK GK +IA  LL
Sbjct: 293 ERKLENQKLQKLCKGGELDAAYEKARSMLEKGIPLSAYARDIFQQVFQKCGKIKIARQLL 352

Query: 366 KKVE 377
           +K E
Sbjct: 353 EKTE 356


>ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 367

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/124 (58%), Positives = 91/124 (73%)
 Frame = +3

Query: 6   PDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLVDKLLKEHGRSDLALKL 185
           PD +TYTALIH +G   NW+ +Y LLMEML +GW PHFHT++LV+ LL+EH + DL +KL
Sbjct: 233 PDGLTYTALIHSHGEVRNWKVSYDLLMEMLGLGWIPHFHTFNLVESLLREHDQLDLCVKL 292

Query: 186 EGKLDIQLLNKHCKAGQLEASYEKLSSMLERGFNLPVYARDAFIRAFQKAGKREIALDLL 365
           E KL+ Q L K CK G+L+A+YEK  SMLE+G  L  YARD F + FQK GK +IA  LL
Sbjct: 293 ERKLENQKLQKLCKGGELDAAYEKAQSMLEKGIPLSAYARDIFQQVFQKCGKIKIARQLL 352

Query: 366 KKVE 377
           +K E
Sbjct: 353 EKTE 356


>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499354|gb|AES80557.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 578

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/122 (59%), Positives = 86/122 (70%)
 Frame = +3

Query: 6   PDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLVDKLLKEHGRSDLALKL 185
           PD++TY ALIH      NW+ AY LLMEML +GW PHFHTY+LVD LL+EH + DL  KL
Sbjct: 444 PDSITYIALIHAQCACKNWKVAYELLMEMLGLGWIPHFHTYNLVDSLLREHDQLDLCHKL 503

Query: 186 EGKLDIQLLNKHCKAGQLEASYEKLSSMLERGFNLPVYARDAFIRAFQKAGKREIALDLL 365
           E KL+ Q L K CK GQL  +YEK+ +MLE+G  L  YARD F   FQK GK EIA DLL
Sbjct: 504 ERKLENQKLLKLCKEGQLGDAYEKVKAMLEKGVRLSAYARDTFEHEFQKCGKLEIAHDLL 563

Query: 366 KK 371
           +K
Sbjct: 564 EK 565