BLASTX nr result

ID: Coptis25_contig00034862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034862
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-lik...    86   1e-14
emb|CAN76166.1| hypothetical protein VITISV_041798 [Vitis vinifera]    85   1e-14
ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-12
ref|XP_002520250.1| r2r3-myb transcription factor, putative [Ric...    64   2e-08

>ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-like [Vitis vinifera]
           gi|302142744|emb|CBI19947.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 66/192 (34%), Positives = 93/192 (48%), Gaps = 10/192 (5%)
 Frame = +3

Query: 6   TTSNSFPLMSLTTHGEYYSKESR-ESSTILEFRKNYKDEVFQASPSNS---WHYSFP-GT 170
           T+SN F      +  + YS  +R E+S + EF    K+ +F  SPS+S   W ++     
Sbjct: 135 TSSNGF--RGSNSRSQQYSSANRLENSRLFEFLNPNKEGIFSISPSSSSPSWTFARSISK 192

Query: 171 STTNSTPLKNFGTGQRDSFSTNSSFCITEKDXXXXXXXXXXXXXXXXXXX-----AAGIN 335
           +T NS+       G RD F++ SS  I +                          A G  
Sbjct: 193 ATNNSSSTDLLRRGGRDHFNSCSSDGIMDSQNSLDRSLYRYFSNSSAYGGYRTSTAFGFP 252

Query: 336 KYNKVVHHPYSCSSIADAYGGSGMIKSDLVRFGDKLATQSSRLRVTTQQEQGDESIKHKD 515
            Y +VV  P   S + D +G   M+K + V FGD   T  +++ +T QQEQ DESIK K+
Sbjct: 253 NYKRVVSGPVGYSKLGDPHG---MLKREFVNFGDNSPT-FAKMIMTNQQEQEDESIKQKN 308

Query: 516 VPFIDFLGVGIS 551
           +PFIDFLGVGIS
Sbjct: 309 IPFIDFLGVGIS 320


>emb|CAN76166.1| hypothetical protein VITISV_041798 [Vitis vinifera]
          Length = 320

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 66/192 (34%), Positives = 93/192 (48%), Gaps = 10/192 (5%)
 Frame = +3

Query: 6   TTSNSFPLMSLTTHGEYYSKESR-ESSTILEFRKNYKDEVFQASPSNS---WHYSFP-GT 170
           T+SN F      +  + YS  +R E+S + EF    K+ +F  SPS+S   W ++     
Sbjct: 134 TSSNGF--RGSNSRSQQYSSANRLENSRLFEFLNPNKEGIFSISPSSSSPSWTFARSISK 191

Query: 171 STTNSTPLKNFGTGQRDSFSTNSSFCITEKDXXXXXXXXXXXXXXXXXXX-----AAGIN 335
           +T NS+       G RD F++ SS  I +                          A G  
Sbjct: 192 ATNNSSSTDLXRRGGRDHFNSCSSDGIMDSQNSLDRSLYRYFSNSSAYGGYRTSTAFGFP 251

Query: 336 KYNKVVHHPYSCSSIADAYGGSGMIKSDLVRFGDKLATQSSRLRVTTQQEQGDESIKHKD 515
            Y +VV  P   S + D +G   M+K + V FGD   T  +++ +T QQEQ DESIK K+
Sbjct: 252 NYKRVVSGPVGYSKLGDPHG---MLKREFVNFGDNSPT-FAKMIMTNQQEQEDESIKQKN 307

Query: 516 VPFIDFLGVGIS 551
           +PFIDFLGVGIS
Sbjct: 308 IPFIDFLGVGIS 319


>ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|222856923|gb|EEE94470.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
 Frame = +3

Query: 54  YYSKESRESSTILEFRKNYKDEVFQASPSNS---WHYSFPGT--STTNSTPLKNFGTGQR 218
           + S+   + S +LEFR   KD +   SPS S   W+++ P T  ++ NS+ +       R
Sbjct: 157 FNSRIGFDDSRVLEFRNPGKDRILSISPSGSSPSWNFA-PSTIAASNNSSSVDLSRREGR 215

Query: 219 DSFSTNSSFCITEKDXXXXXXXXXXXXXXXXXXXAA------GINKYNKVVHHPY-SCSS 377
           D++  +S FC TE                     +       G+  Y +VV  P+ S   
Sbjct: 216 DNYFNSSLFCTTESSKLISDQPIYRYYTNSSVCGSYRSSSIFGLPNYRRVVPSPFGSYLK 275

Query: 378 IADAYGGSGMIKSDLVRFGDKLATQSSRLRVTTQQEQGD-ESIKHKDVPFIDFLGVGIS 551
           + D Y   GMIK +L    +  +T ++    +  QE+GD ESIKHKD PFIDFLGVGIS
Sbjct: 276 LGDDYENHGMIKKELASCHNS-STLNNLRATSNHQEKGDHESIKHKDAPFIDFLGVGIS 333


>ref|XP_002520250.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223540469|gb|EEF42036.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 346

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 30/212 (14%)
 Frame = +3

Query: 6   TTSNSFPLMSLTTHGEYYSKESR---ESST--ILEFRKNYKDE----VFQASPSNSWHYS 158
           TT+N F L    +   + S  SR   E+ST   LEFR    D     V  +S S+   ++
Sbjct: 137 TTTNDFHLRKSRSQDLFVSSSSRIGFENSTARFLEFRDLNTDRLLSVVSSSSTSSPNFWT 196

Query: 159 FPGTSTT------NSTPLKNFGTGQ-RDSFSTNSSFCITEKDXXXXXXXXXXXXXXXXXX 317
           F  ++ T      N++   +  T + RD++    SFC T++                   
Sbjct: 197 FASSTKTAPFNKNNASSADHLSTEEGRDNYFNTYSFCTTDQSSKFSDQSIYNRCYPNSSS 256

Query: 318 XAA--------GINKYNKVVHHPYSCSSIADA-YGGSGMIKSDLVRFGDKLATQSSRL-- 464
                      G+  Y +V+  P+ C  I D  +   G IK D+++        SS L  
Sbjct: 257 VYGNYKNPAVFGLPNYRRVIPSPFGCLKIGDHDFENHGTIKKDVLK---NFCENSSTLIT 313

Query: 465 RVTTQQEQGD---ESIKHKDVPFIDFLGVGIS 551
            ++ Q+EQG    ESI+ K+VPFIDFLGVGIS
Sbjct: 314 NMSNQEEQGGDHHESIRQKEVPFIDFLGVGIS 345


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