BLASTX nr result

ID: Coptis25_contig00034857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034857
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]   116   4e-24
emb|CAN64381.1| hypothetical protein VITISV_024226 [Vitis vinifera]   102   5e-20
emb|CAN80432.1| hypothetical protein VITISV_014125 [Vitis vinifera]   102   8e-20
emb|CAN64960.1| hypothetical protein VITISV_006740 [Vitis vinifera]   100   2e-19
emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]   100   4e-19

>emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
          Length = 635

 Score =  116 bits (290), Expect = 4e-24
 Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 15/220 (6%)
 Frame = +1

Query: 25  PLMRPLSEILPLIKNVQGYEGP---RTIPAEMPNKPYCDYHQVHNHETNDCYALKWLVQR 195
           PL +   ++ P+I+++ G+  P   R+ P+E      CDYH+ H H T  C +L ++V+ 
Sbjct: 317 PLTKSYEKLFPIIRDLPGFRWPVPIRSNPSERDRNKRCDYHKDHGHTTETCRSLHYMVED 376

Query: 196 LVEKGMLREFV-------GEPQNREQGAAAGRILGTINVIFSG---EALSHNAHRDKVRR 345
           L++ G L++++       G    R   A A  +   IN I  G   +  S    R ++ R
Sbjct: 377 LLKAGHLKQYIRTVPKGEGSSHGRGPCAPAAPVRVVINYIHGGPLDDEYSSKRKRQRLLR 436

Query: 346 TASIQQ-VNESHRGQRYRE-ETMEETIIFSKADLRAVDAPHEDALVITVTMGNYVVKRVL 519
            A++++ V+    G        ++ TI+F   D   V  PH DAL++T+ +G++ VKR+L
Sbjct: 437 AATVREHVSSIQPGLASGGIHPIDGTIVFPAVDPAQVLQPHRDALILTLGVGDFDVKRIL 496

Query: 520 VDCGSAVDLLFRGALEEMRIDPGQLRPPRTSLFGFNGSVT 639
           VD GS+ DLL    +++M   P  L  P  +LFGFNGS T
Sbjct: 497 VDPGSSADLLQVAVIKQMGFIPSSLENPERTLFGFNGSST 536


>emb|CAN64381.1| hypothetical protein VITISV_024226 [Vitis vinifera]
          Length = 471

 Score =  102 bits (255), Expect = 5e-20
 Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
 Frame = +1

Query: 25  PLMRPLSEILPLIKNVQGYEGPRTI---PAEMPNKPYCDYHQVHNHETNDCYALKWLVQR 195
           PL +   ++LP+I ++ G++ P+ I   P+E      CDY + H H T  C +L ++V+ 
Sbjct: 164 PLTKSYEKLLPIIHDLPGFKWPKPIRSNPSERNRNKRCDYRKDHGHTTEMCRSLHYMVED 223

Query: 196 LVEKGMLREFVGEPQNREQGAAAGR--------ILGTINVIFS---GEALSHNAHRDKVR 342
           L++ G L++++     R +G++ GR        +   IN I      +  S    R ++ 
Sbjct: 224 LLKVGHLKQYI-RTTPRGEGSSHGRGPRAPTXPVRAVINYIHREPLDDEYSSKRKRQRLL 282

Query: 343 RTASIQQVNESHRGQRYREET--MEETIIFSKADLRAVDAPHEDALVITVTMGNYVVKRV 516
           R A++++   S R          ++ TI+F   D   V  PH DAL++T+ +G++ VKR+
Sbjct: 283 RAATVREHVSSIRPGLVDGSIHPIDGTIVFPVVDPTQVLQPHRDALILTLGVGDFDVKRI 342

Query: 517 LVDCGSAVDLLFRGALEEMRIDPGQLRPPRTSLFGFNGSVT 639
           LVD GS  DLL    +++M   P  L  P  +L GFN S T
Sbjct: 343 LVDPGSFADLLQVAVIKQMGFIPSSLENPGRTLSGFNSSST 383


>emb|CAN80432.1| hypothetical protein VITISV_014125 [Vitis vinifera]
          Length = 662

 Score =  102 bits (253), Expect = 8e-20
 Identities = 73/226 (32%), Positives = 112/226 (49%), Gaps = 21/226 (9%)
 Frame = +1

Query: 25   PLMRPLSEILPLIKNVQGYEGPR---TIPAEMPNKPYCDYHQVHNHETNDCYALKWLVQR 195
            PL  P  +ILP+I+ +  +  PR   T P+   +   C +H+ H H T  C +L++LV+R
Sbjct: 431  PLSIPYEKILPMIQGLSNFRWPRPQGTDPSIRDHSKRCAFHKEHGHTTETCRSLQYLVER 490

Query: 196  LVEKGMLREFV----GE--------PQNREQGAAAGRILGTINVIFSGEALSHNAHRDKV 339
            L++ G L++++    GE        P+     AA   ++  IN   S E       R K+
Sbjct: 491  LIKAGHLKQYLRSDAGEKVTSQHHNPRAPRAPAAPKTVINYINGGPSDEEYDSRRKRQKL 550

Query: 340  RRTASIQQVNESHR------GQRYREETMEETIIFSKADLRAVDAPHEDALVITVTMGNY 501
             R ASI++   S R      G R     ++ TIIF  AD      PH DAL++++ +G++
Sbjct: 551  LRAASIRERINSIRPGLTGGGPR----PIDGTIIFPPADPTRTLQPHRDALILSLEIGDF 606

Query: 502  VVKRVLVDCGSAVDLLFRGALEEMRIDPGQLRPPRTSLFGFNGSVT 639
             V+R+LVD G+  DL+    +  M      L  P   L GFNGS T
Sbjct: 607  DVRRILVDPGTLADLVQASVVGHMGHSLASLENPGRILSGFNGSST 652


>emb|CAN64960.1| hypothetical protein VITISV_006740 [Vitis vinifera]
          Length = 502

 Score =  100 bits (249), Expect = 2e-19
 Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 21/226 (9%)
 Frame = +1

Query: 25  PLMRPLS----EILPLIKNVQGYEGPR---TIPAEMPNKPYCDYHQVHNHETNDCYALKW 183
           P + PLS    ++LP+I+ +  +  PR   T P+       C +H+ H H T  C +L++
Sbjct: 190 PPITPLSVSHEKLLPMIQGLSDFRWPRPLETDPSIRDRSKKCAFHKDHGHTTETCRSLQY 249

Query: 184 LVQRLVEKGMLREFV-----GEPQNREQGAAAGR-------ILGTINVIFSGEALSHNAH 327
           LV+RL++ G L++++     G   ++   + A R       ++  IN   S E  +    
Sbjct: 250 LVERLIKAGQLKQYIRSDTGGRDVSQHHNSGASRAPVAPKAVINYINGGPSDEEYNSRRK 309

Query: 328 RDKVRRTASIQQVNESHRGQRYRE--ETMEETIIFSKADLRAVDAPHEDALVITVTMGNY 501
           R K+ R ASI++   S R     E    ++ TIIF   D      PH DAL++++ +G++
Sbjct: 310 RQKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFPPVDPTRTLQPHRDALILSLEIGDF 369

Query: 502 VVKRVLVDCGSAVDLLFRGALEEMRIDPGQLRPPRTSLFGFNGSVT 639
            V+R+LVD GS+ DL+    +  M      L  P   L GFNGS T
Sbjct: 370 DVRRILVDPGSSADLVQASVIGHMEHSLAGLENPGRILSGFNGSST 415


>emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]
          Length = 508

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 17/222 (7%)
 Frame = +1

Query: 25  PLMRPLSEILPLIKNVQGYEGPRTIPAEMPNKPY---CDYHQVHNHETNDCYALKWLVQR 195
           PL     ++LP+I+ +  +  PR + A+   + +   C +H+ H+H T +C  L +LV+R
Sbjct: 188 PLSISYEKLLPMIQGLSDFRWPRPLEADPSRRDHSKKCVFHKEHDHTTEECRCLHFLVER 247

Query: 196 LVEKGMLREFV-------GEPQNREQGA-----AAGRILGTINVIFSGEALSHNAHRDKV 339
           L++ G L++++          QN   GA     A   ++  IN   S E  +    R K+
Sbjct: 248 LIKVGHLKQYLHSDAESRNTSQNHNSGAPRAPIAPKAVINYINEGPSDEEYASKRKRQKL 307

Query: 340 RRTASIQQ-VNESHRGQRYR-EETMEETIIFSKADLRAVDAPHEDALVITVTMGNYVVKR 513
            R AS+++ +N    G        ++ TIIF   D      PH  AL++++ +G++ V+R
Sbjct: 308 LRAASVRERINSIRSGLTGGGPRPIDGTIIFPPVDPTWTLQPHRGALILSLEIGDFDVRR 367

Query: 514 VLVDCGSAVDLLFRGALEEMRIDPGQLRPPRTSLFGFNGSVT 639
           +LVD GS+VDL+    +  M      L  PR  L GFNGS T
Sbjct: 368 ILVDPGSSVDLVQASVVGRMGHSLTSLENPRRILPGFNGSST 409


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