BLASTX nr result

ID: Coptis25_contig00034848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034848
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37208.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258...    59   5e-07
emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]    59   5e-07

>emb|CBI37208.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 48/148 (32%), Positives = 58/148 (39%), Gaps = 1/148 (0%)
 Frame = -2

Query: 595 YSQPIPQSSDNQNTFTLENPAPNLSKSNLTDYQYDWLNDTVQN-LAPPAENCVFPSMQPT 419
           Y QPI QS+D Q T+   N A N+   +  D    W   T  +   PP EN    S +PT
Sbjct: 375 YGQPILQSNDCQGTYLHGNQAQNVVNPSFADISGSWPGGTSHSDQPPPIENSQLQSAEPT 434

Query: 418 SQPSTENSKLLCIQPMSQPSTVTGSTTQCPAATNPSLIDSDFDSWIWSLGDKSDHETGNE 239
             PS                 V     Q P +TNP  +D  FDSWI           G+ 
Sbjct: 435 FIPS-----------------VMEFNPQFPVSTNPDPLDL-FDSWILENQSVQGAPEGSV 476

Query: 238 TVRSELGFVPSQPELVNAAMLLFDFENS 155
                L      P  V+A ML FDFE S
Sbjct: 477 PNGLNLTSQDHAPAAVDAGMLYFDFETS 504


>ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258397 [Vitis vinifera]
          Length = 511

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 48/148 (32%), Positives = 58/148 (39%), Gaps = 1/148 (0%)
 Frame = -2

Query: 595 YSQPIPQSSDNQNTFTLENPAPNLSKSNLTDYQYDWLNDTVQN-LAPPAENCVFPSMQPT 419
           Y QPI QS+D Q T+   N A N+   +  D    W   T  +   PP EN    S +PT
Sbjct: 375 YGQPILQSNDCQGTYLHGNQAQNVVNPSFADISGSWPGGTSHSDQPPPIENSQLQSAEPT 434

Query: 418 SQPSTENSKLLCIQPMSQPSTVTGSTTQCPAATNPSLIDSDFDSWIWSLGDKSDHETGNE 239
             PS                 V     Q P +TNP  +D  FDSWI           G+ 
Sbjct: 435 FIPS-----------------VMEFNPQFPVSTNPDPLDL-FDSWILENQSVQGAPEGSV 476

Query: 238 TVRSELGFVPSQPELVNAAMLLFDFENS 155
                L      P  V+A ML FDFE S
Sbjct: 477 PNGLNLTSQDHAPAAVDAGMLYFDFETS 504


>emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]
          Length = 441

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 48/148 (32%), Positives = 58/148 (39%), Gaps = 1/148 (0%)
 Frame = -2

Query: 595 YSQPIPQSSDNQNTFTLENPAPNLSKSNLTDYQYDWLNDTVQN-LAPPAENCVFPSMQPT 419
           Y QPI QS+D Q T+   N A N+   +  D    W   T  +   PP EN    S +PT
Sbjct: 305 YGQPILQSNDCQGTYLHGNQAQNVVNPSFADISGSWPGGTSHSDQPPPIENSQLQSAEPT 364

Query: 418 SQPSTENSKLLCIQPMSQPSTVTGSTTQCPAATNPSLIDSDFDSWIWSLGDKSDHETGNE 239
             PS                 V     Q P +TNP  +D  FDSWI           G+ 
Sbjct: 365 FIPS-----------------VMEFNPQFPVSTNPDPLDL-FDSWILENQSVQGAPEGSV 406

Query: 238 TVRSELGFVPSQPELVNAAMLLFDFENS 155
                L      P  V+A ML FDFE S
Sbjct: 407 PNGLNLTSQDHAPAAVDAGMLYFDFETS 434


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