BLASTX nr result

ID: Coptis25_contig00034842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034842
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281093.1| PREDICTED: probable transmembrane ascorbate ...   345   1e-92
gb|AFK43807.1| unknown [Lotus japonicus]                              340   6e-91
ref|XP_003614405.1| Cytochrome b reductase [Medicago truncatula]...   339   9e-91
gb|AFK40290.1| unknown [Lotus japonicus]                              338   1e-90
ref|XP_002315965.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89

>ref|XP_002281093.1| PREDICTED: probable transmembrane ascorbate ferrireductase 4 [Vitis
           vinifera] gi|297737878|emb|CBI27079.3| unnamed protein
           product [Vitis vinifera]
          Length = 242

 Score =  345 bits (886), Expect = 1e-92
 Identities = 169/238 (71%), Positives = 203/238 (85%), Gaps = 1/238 (0%)
 Frame = -2

Query: 790 ASESHAILPLLIFARVSGXXXXXXXXXXXLNFQTSFIPLHNPQ-NLIYSILHPLLMVIGF 614
           AS +   LPLL+FARVS            L F++SFI  H+ Q +++Y++LHPL MVIGF
Sbjct: 4   ASSASLPLPLLLFARVSALFVALLVLFWALAFKSSFISHHSSQEDIVYAVLHPLFMVIGF 63

Query: 613 ILISGEAILVHRWLPGSRSLKKSVHLCLQGVALASGIFGIWTKFYGENGIVANFYSLHSW 434
           ILISGEAILVHRWLPGSR+LKKSVHL +QG+ALASG+FGIWT F+G++GIVANF+SLHSW
Sbjct: 64  ILISGEAILVHRWLPGSRNLKKSVHLSMQGLALASGVFGIWTNFHGQDGIVANFWSLHSW 123

Query: 433 MGLICISLFGAQWLLGFLSFWHRGEMRSTRLRILPWHVFLGLYTYGLAIATAETGLLEKL 254
           MGLIC+ LFGAQWL+GFLSFWHRGEMR+TR+ +LPWHVFLGLYTYGLA+ATAETGLLEKL
Sbjct: 124 MGLICMLLFGAQWLIGFLSFWHRGEMRTTRVSVLPWHVFLGLYTYGLAVATAETGLLEKL 183

Query: 253 TFLQTRGTVLKHSPESIIVNCLGLGLALLSGVIILAAVSPRHQTLPAKLMYSNTKRLS 80
           TFLQT   V KH  ES++VN +G+GLALLSG++ILAAV P++QTLP+KLMYS+TK LS
Sbjct: 184 TFLQTNRNVSKHCTESMVVNGVGVGLALLSGIVILAAVCPKYQTLPSKLMYSDTKCLS 241


>gb|AFK43807.1| unknown [Lotus japonicus]
          Length = 243

 Score =  340 bits (871), Expect = 6e-91
 Identities = 174/244 (71%), Positives = 203/244 (83%), Gaps = 2/244 (0%)
 Frame = -2

Query: 805 LLPTMASESHAILPLLIFARVSGXXXXXXXXXXXLNFQTSFIPLH-NPQNLIYSILHPLL 629
           L PT+ S     +PLL FAR+SG           L F++SF+    + Q+LIY+ILHPLL
Sbjct: 4   LSPTLPS-----VPLLFFARISGLTVALLVLFWALAFKSSFLTHSLSQQDLIYAILHPLL 58

Query: 628 MVIGFILISGEAILVHRWLPGSRSLKKSVHLCLQGVALASGIFGIWTKFYGENGIVANFY 449
           MVIGFI++SG+AILVHRWLPGSRSLKKSVHLCLQGVAL SGIFGIWTKF G+NGIVANFY
Sbjct: 59  MVIGFIILSGKAILVHRWLPGSRSLKKSVHLCLQGVALTSGIFGIWTKFQGQNGIVANFY 118

Query: 448 SLHSWMGLICISLFGAQWLLGFLSFWHRGEMRSTRLRILPWHVFLGLYTYGLAIATAETG 269
           SLHSWMGL+C+SLFGAQWL+GFL+FWHRGE RS R+RILPWH+FLGLYTYGLAIATAETG
Sbjct: 119 SLHSWMGLLCVSLFGAQWLMGFLNFWHRGEARSARIRILPWHIFLGLYTYGLAIATAETG 178

Query: 268 LLEKLTFLQTRGTVLKHSPESIIVNCLGLGLALLSGVIILAAVSPRHQ-TLPAKLMYSNT 92
           LLEKLT LQT+  V KHS ESI+VN LGLGLALLS  +ILAAVSP++Q +L +KL+Y +T
Sbjct: 179 LLEKLTLLQTKRNVPKHSTESIVVNSLGLGLALLSCFVILAAVSPKYQSSLQSKLLYLDT 238

Query: 91  KRLS 80
           + LS
Sbjct: 239 RCLS 242


>ref|XP_003614405.1| Cytochrome b reductase [Medicago truncatula]
           gi|355515740|gb|AES97363.1| Cytochrome b reductase
           [Medicago truncatula]
          Length = 244

 Score =  339 bits (869), Expect = 9e-91
 Identities = 167/235 (71%), Positives = 198/235 (84%), Gaps = 3/235 (1%)
 Frame = -2

Query: 775 AILPLLIFARVSGXXXXXXXXXXXLNFQTSFIPLHNP---QNLIYSILHPLLMVIGFILI 605
           ++LPLL  ARV G           L F++SF+   N    Q+LIY++LHP+LMVIGFIL+
Sbjct: 9   SLLPLLFLARVCGLSVAFLVLFWALTFKSSFLNTSNSLPQQDLIYAVLHPVLMVIGFILL 68

Query: 604 SGEAILVHRWLPGSRSLKKSVHLCLQGVALASGIFGIWTKFYGENGIVANFYSLHSWMGL 425
           SGEAILVHRWLPGSR LKKSVHLCLQGVALASGIFGIWTKF   +GIVANFYSLHSWMGL
Sbjct: 69  SGEAILVHRWLPGSRGLKKSVHLCLQGVALASGIFGIWTKFQVNDGIVANFYSLHSWMGL 128

Query: 424 ICISLFGAQWLLGFLSFWHRGEMRSTRLRILPWHVFLGLYTYGLAIATAETGLLEKLTFL 245
           IC+SLFGAQWL+GFL+FWHRGE+R+ R++ILPWHVFLGLYTY LA+ATAETGLLEKLTFL
Sbjct: 129 ICVSLFGAQWLIGFLNFWHRGEIRTVRIKILPWHVFLGLYTYALAVATAETGLLEKLTFL 188

Query: 244 QTRGTVLKHSPESIIVNCLGLGLALLSGVIILAAVSPRHQTLPAKLMYSNTKRLS 80
           QT+  V KHS ES++VN LGLGLALLSG +ILAAVSP++Q L +KL+YS+++ L+
Sbjct: 189 QTQRNVSKHSTESMVVNSLGLGLALLSGFVILAAVSPKYQILQSKLLYSDSRCLA 243


>gb|AFK40290.1| unknown [Lotus japonicus]
          Length = 243

 Score =  338 bits (868), Expect = 1e-90
 Identities = 174/244 (71%), Positives = 202/244 (82%), Gaps = 2/244 (0%)
 Frame = -2

Query: 805 LLPTMASESHAILPLLIFARVSGXXXXXXXXXXXLNFQTSFIPLH-NPQNLIYSILHPLL 629
           L PT+ S     +P L FAR+SG           L F++SF+    + Q+LIY+ILHPLL
Sbjct: 4   LSPTLPS-----VPPLFFARISGLTVALLVLFWALAFKSSFLTHSLSQQDLIYAILHPLL 58

Query: 628 MVIGFILISGEAILVHRWLPGSRSLKKSVHLCLQGVALASGIFGIWTKFYGENGIVANFY 449
           MVIGFI++SGEAILVHRWLPGSRSLKKSVHLCLQGVAL SGIFGIWTKF G+NGIVANFY
Sbjct: 59  MVIGFIILSGEAILVHRWLPGSRSLKKSVHLCLQGVALTSGIFGIWTKFQGQNGIVANFY 118

Query: 448 SLHSWMGLICISLFGAQWLLGFLSFWHRGEMRSTRLRILPWHVFLGLYTYGLAIATAETG 269
           SLHSWMGL+C+SLFGAQWL+GFL+FWHRGE RS R+RILPWH+FLGLYTYGLAIATAETG
Sbjct: 119 SLHSWMGLLCVSLFGAQWLMGFLNFWHRGEARSARIRILPWHIFLGLYTYGLAIATAETG 178

Query: 268 LLEKLTFLQTRGTVLKHSPESIIVNCLGLGLALLSGVIILAAVSPRHQ-TLPAKLMYSNT 92
           LLEKLT LQT+  V KHS ESI+VN LGLGLALLS  +ILAAVSP++Q +L +KL+Y +T
Sbjct: 179 LLEKLTLLQTKRNVPKHSTESIVVNSLGLGLALLSCFVILAAVSPKYQSSLQSKLLYLDT 238

Query: 91  KRLS 80
           + LS
Sbjct: 239 RCLS 242


>ref|XP_002315965.1| predicted protein [Populus trichocarpa] gi|222865005|gb|EEF02136.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  335 bits (859), Expect = 1e-89
 Identities = 166/236 (70%), Positives = 195/236 (82%), Gaps = 1/236 (0%)
 Frame = -2

Query: 787 SESHAILPLLIFARVSGXXXXXXXXXXXLNFQTSFIPLHNPQ-NLIYSILHPLLMVIGFI 611
           S S +++PLL FAR+SG           L F++SF+P    Q +L+Y++LHPLLMVIGFI
Sbjct: 4   SVSSSLVPLLFFARISGLLAAALVIYWALVFKSSFLPQSTSQEDLVYAVLHPLLMVIGFI 63

Query: 610 LISGEAILVHRWLPGSRSLKKSVHLCLQGVALASGIFGIWTKFYGENGIVANFYSLHSWM 431
           LISGEAILVHRWLPGSR  KKSVHLCLQG+ALA GIFGIWTKF+G +GIVANF+SLHSWM
Sbjct: 64  LISGEAILVHRWLPGSRGFKKSVHLCLQGLALACGIFGIWTKFHGNDGIVANFFSLHSWM 123

Query: 430 GLICISLFGAQWLLGFLSFWHRGEMRSTRLRILPWHVFLGLYTYGLAIATAETGLLEKLT 251
           GLICISLFGAQWL+GF SFWHRGEMR+ R+R+LPWHVFLGLYTYGLA+ATAETGLLEK+T
Sbjct: 124 GLICISLFGAQWLMGFRSFWHRGEMRTVRIRVLPWHVFLGLYTYGLAVATAETGLLEKIT 183

Query: 250 FLQTRGTVLKHSPESIIVNCLGLGLALLSGVIILAAVSPRHQTLPAKLMYSNTKRL 83
           FLQT+    KHS ES++VN LGL LALLSG+IILAAVSP+ Q     L YS +K++
Sbjct: 184 FLQTKKDASKHSSESMVVNSLGLSLALLSGIIILAAVSPKFQ---RDLTYSESKKM 236


Top