BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034840
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   136   2e-30
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]        110   9e-23

>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/94 (68%), Positives = 79/94 (84%)
 Frame = -2

Query: 282 IHSQTIRFGLDADVHVMTALIQMYSACGVILDARRLFDGMPTRDVVSWNAMLAGYSKVGD 103
           IH Q I  GL +D+HV+TALIQMYS+CG + +AR+LFDG+  RDV  WNAM+AGY+KVGD
Sbjct: 161 IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGD 220

Query: 102 LESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1
           +++AR LFE+M ERNVISWT VIAGYAQM+ PNE
Sbjct: 221 VDNARHLFERMPERNVISWTAVIAGYAQMDRPNE 254


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/94 (68%), Positives = 79/94 (84%)
 Frame = -2

Query: 282 IHSQTIRFGLDADVHVMTALIQMYSACGVILDARRLFDGMPTRDVVSWNAMLAGYSKVGD 103
           IH Q I  GL +D+HV+TALIQMYS+CG + +AR+LFDG+  RDV  WNAM+AGY+KVGD
Sbjct: 161 IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGD 220

Query: 102 LESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1
           +++AR LFE+M ERNVISWT VIAGYAQM+ PNE
Sbjct: 221 VDNARHLFERMPERNVISWTAVIAGYAQMDRPNE 254


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
           gi|449493602|ref|XP_004159370.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 548

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/94 (62%), Positives = 76/94 (80%)
 Frame = -2

Query: 282 IHSQTIRFGLDADVHVMTALIQMYSACGVILDARRLFDGMPTRDVVSWNAMLAGYSKVGD 103
           IH+QT+   LD DV+V T+LIQMYS+CG + DAR+LFD +  +DV  WNAM+AGY KVG+
Sbjct: 144 IHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGE 203

Query: 102 LESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1
           L+SAR +F +M +RNVISWTT+IAGYAQ N P+E
Sbjct: 204 LKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHE 237


>ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|222841407|gb|EEE78954.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/98 (61%), Positives = 76/98 (77%), Gaps = 4/98 (4%)
 Frame = -2

Query: 282 IHSQTIRFGLDADVHVMTALIQMYSA--CGVILDARRLFDGMP--TRDVVSWNAMLAGYS 115
           +HSQ+IRFGL +D+HV+TA +QMYS+   G I DAR++FDGM   T DV  WNAML GY+
Sbjct: 100 LHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYA 159

Query: 114 KVGDLESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1
           K GDL +AR LFE+M +RNVISWT +I GYAQ N P++
Sbjct: 160 KHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHD 197


>gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
          Length = 505

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
 Frame = -2

Query: 282 IHSQTIRFG-LDADVHVMTALIQMYSACGVILDARRLFDGMPTRDVVSWNAMLAGYSKVG 106
           +HS  +R G + +D HV ++L+Q+Y  CG + DAR +FD M  RDVV+WN M+AGY K G
Sbjct: 99  LHSLLLRTGHVASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAG 158

Query: 105 DLESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1
           D   AR LF+ M ERNV+SWTTVI GYAQM  P +
Sbjct: 159 DQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEK 193