BLASTX nr result
ID: Coptis25_contig00034840
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034840 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30 emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera] 136 2e-30 ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi... 125 3e-27 ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|2... 120 1e-25 gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays] 110 9e-23 >ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310 [Vitis vinifera] Length = 576 Score = 136 bits (342), Expect = 2e-30 Identities = 64/94 (68%), Positives = 79/94 (84%) Frame = -2 Query: 282 IHSQTIRFGLDADVHVMTALIQMYSACGVILDARRLFDGMPTRDVVSWNAMLAGYSKVGD 103 IH Q I GL +D+HV+TALIQMYS+CG + +AR+LFDG+ RDV WNAM+AGY+KVGD Sbjct: 161 IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGD 220 Query: 102 LESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1 +++AR LFE+M ERNVISWT VIAGYAQM+ PNE Sbjct: 221 VDNARHLFERMPERNVISWTAVIAGYAQMDRPNE 254 >emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera] Length = 576 Score = 136 bits (342), Expect = 2e-30 Identities = 64/94 (68%), Positives = 79/94 (84%) Frame = -2 Query: 282 IHSQTIRFGLDADVHVMTALIQMYSACGVILDARRLFDGMPTRDVVSWNAMLAGYSKVGD 103 IH Q I GL +D+HV+TALIQMYS+CG + +AR+LFDG+ RDV WNAM+AGY+KVGD Sbjct: 161 IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGD 220 Query: 102 LESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1 +++AR LFE+M ERNVISWT VIAGYAQM+ PNE Sbjct: 221 VDNARHLFERMPERNVISWTAVIAGYAQMDRPNE 254 >ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Cucumis sativus] gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Cucumis sativus] Length = 548 Score = 125 bits (315), Expect = 3e-27 Identities = 59/94 (62%), Positives = 76/94 (80%) Frame = -2 Query: 282 IHSQTIRFGLDADVHVMTALIQMYSACGVILDARRLFDGMPTRDVVSWNAMLAGYSKVGD 103 IH+QT+ LD DV+V T+LIQMYS+CG + DAR+LFD + +DV WNAM+AGY KVG+ Sbjct: 144 IHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGE 203 Query: 102 LESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1 L+SAR +F +M +RNVISWTT+IAGYAQ N P+E Sbjct: 204 LKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHE 237 >ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa] Length = 508 Score = 120 bits (300), Expect = 1e-25 Identities = 60/98 (61%), Positives = 76/98 (77%), Gaps = 4/98 (4%) Frame = -2 Query: 282 IHSQTIRFGLDADVHVMTALIQMYSA--CGVILDARRLFDGMP--TRDVVSWNAMLAGYS 115 +HSQ+IRFGL +D+HV+TA +QMYS+ G I DAR++FDGM T DV WNAML GY+ Sbjct: 100 LHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYA 159 Query: 114 KVGDLESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1 K GDL +AR LFE+M +RNVISWT +I GYAQ N P++ Sbjct: 160 KHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHD 197 >gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays] Length = 505 Score = 110 bits (276), Expect = 9e-23 Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 1/95 (1%) Frame = -2 Query: 282 IHSQTIRFG-LDADVHVMTALIQMYSACGVILDARRLFDGMPTRDVVSWNAMLAGYSKVG 106 +HS +R G + +D HV ++L+Q+Y CG + DAR +FD M RDVV+WN M+AGY K G Sbjct: 99 LHSLLLRTGHVASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAG 158 Query: 105 DLESARILFEKMSERNVISWTTVIAGYAQMNHPNE 1 D AR LF+ M ERNV+SWTTVI GYAQM P + Sbjct: 159 DQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEK 193