BLASTX nr result

ID: Coptis25_contig00034798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034798
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632759.1| PREDICTED: ABC transporter B family member 1...    66   3e-09
emb|CBI35827.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, AB...    64   1e-08
ref|XP_002529182.1| multidrug resistance protein 1, 2, putative ...    64   2e-08
ref|XP_003529846.1| PREDICTED: putative multidrug resistance pro...    61   8e-08

>ref|XP_003632759.1| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
          Length = 1542

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -1

Query: 237  ADYIAVVKDGALAEFGSHDELMSSHLNGAYANLVRTEMEANAFS 106
            A  IAVVKDGA+ E+GSHD L++SHLNG YA+LVR E EA+AFS
Sbjct: 1499 AHMIAVVKDGAVTEYGSHDTLLASHLNGVYASLVRAETEASAFS 1542


>emb|CBI35827.3| unnamed protein product [Vitis vinifera]
          Length = 1140

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -1

Query: 237  ADYIAVVKDGALAEFGSHDELMSSHLNGAYANLVRTEMEANAFS 106
            A  IAVVKDGA+ E+GSHD L++SHLNG YA+LVR E EA+AFS
Sbjct: 1097 AHMIAVVKDGAVTEYGSHDTLLASHLNGVYASLVRAETEASAFS 1140


>ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222873326|gb|EEF10457.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1547

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = -1

Query: 237  ADYIAVVKDGALAEFGSHDELMSSHLNGAYANLVRTEMEANAFS 106
            AD IAVVKDGA+ E+GSHD L++SH NG YA++VR E E NAF+
Sbjct: 1504 ADMIAVVKDGAVVEYGSHDALLNSHRNGLYASMVRAETETNAFA 1547


>ref|XP_002529182.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223531360|gb|EEF33196.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1580

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = -1

Query: 237  ADYIAVVKDGALAEFGSHDELMSSHLNGAYANLVRTEMEANAFS 106
            AD IAV+KDGA+ E+GSHD L++SHLNG +A LVR E EA AF+
Sbjct: 1537 ADMIAVMKDGAVIEYGSHDALLNSHLNGVFAGLVRAETEATAFA 1580


>ref|XP_003529846.1| PREDICTED: putative multidrug resistance protein-like [Glycine max]
          Length = 532

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = -1

Query: 237 ADYIAVVKDGALAEFGSHDELMSSHLNGAYANLVRTEMEANAFS 106
           AD IAV++DG + E+GSHD+LM+S  NG YA+LVR E EANAFS
Sbjct: 489 ADKIAVMRDGEVVEYGSHDKLMASGQNGLYASLVRAETEANAFS 532


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