BLASTX nr result
ID: Coptis25_contig00034791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00034791
(322 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,... 143 1e-32
ref|XP_002300741.1| predicted protein [Populus trichocarpa] gi|2... 136 2e-30
ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like A... 130 1e-28
ref|XP_003615697.1| Myrosinase-binding protein-like protein [Med... 128 4e-28
ref|XP_003552950.1| PREDICTED: agglutinin-like [Glycine max] 128 6e-28
>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1218
Score = 143 bits (361), Expect = 1e-32
Identities = 61/107 (57%), Positives = 85/107 (79%)
Frame = +2
Query: 2 AGHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDS 181
+GHYGS+N W PV +RSLTFQSN++TYGPFG ++G FSF M GG+IVGFHG+ +++D+
Sbjct: 708 SGHYGSLNQWGPVFVRSLTFQSNKRTYGPFGVEQGTYFSFPMTGGRIVGFHGKGGYFVDA 767
Query: 182 VGVYLKSLTAKPNLSSKALVSSQSFVANGTDKFGYNVVQGSVGQNYD 322
+G+YLK + + SSKALV ++SFV NGT+ GY+V+QG+ G +YD
Sbjct: 768 IGIYLKPVPQQK--SSKALVQAKSFVNNGTENIGYSVIQGTAGNSYD 812
Score = 74.3 bits (181), Expect = 1e-11
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +2
Query: 2 AGHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDS 181
+G YG + P +I+SLTF +N+ +GPFG ++G FS NGGKIVGFHG+ +LD+
Sbjct: 938 SGTYGPLMFMGPNIIKSLTFYTNKGKHGPFGDEQGPSFSTKPNGGKIVGFHGKEGLFLDA 997
Query: 182 VGVYLKSLTAKP 217
+GV L KP
Sbjct: 998 IGVNLMEGKVKP 1009
Score = 67.8 bits (164), Expect = 9e-10
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +2
Query: 2 AGHYGSIN-DWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLD 178
+G+YG + D P +++SLTF ++R YGPFG + G F+ + GK+VGFHGR YLD
Sbjct: 1134 SGYYGPASRDERPTVVKSLTFYTSRGQYGPFGEEIGTFFTSTTTEGKVVGFHGRCGAYLD 1193
Query: 179 SVGVYLKSLTAKPNLSSKAL 238
++GV+++ S +L
Sbjct: 1194 AIGVHMQHWLGNNRTSRSSL 1213
>ref|XP_002300741.1| predicted protein [Populus trichocarpa] gi|222842467|gb|EEE80014.1|
predicted protein [Populus trichocarpa]
Length = 520
Score = 136 bits (342), Expect = 2e-30
Identities = 60/106 (56%), Positives = 84/106 (79%)
Frame = +2
Query: 5 GHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDSV 184
G+YGS++ W PV +RSLTF+SN+KTYGPFG ++G FSF M+GGKIVGFHG+S WYLD++
Sbjct: 19 GYYGSLDGWGPVFVRSLTFRSNKKTYGPFGVEQGTYFSFPMSGGKIVGFHGKSGWYLDAI 78
Query: 185 GVYLKSLTAKPNLSSKALVSSQSFVANGTDKFGYNVVQGSVGQNYD 322
G+YLK L + +SKALV S+S++ NGT+ Y+++QG+ G +D
Sbjct: 79 GIYLKPL--QKQKTSKALVQSKSYINNGTENISYSMMQGA-GNGFD 121
Score = 72.0 bits (175), Expect = 5e-11
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +2
Query: 5 GHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDSV 184
G YG + P +IRSLTF +N+ +GPFG ++G F+ ++ GKI+GFHGR + LD++
Sbjct: 239 GTYGPLMYMGPNIIRSLTFYTNKGKHGPFGEEQGPTFTNKIDEGKIIGFHGREGFLLDAI 298
Query: 185 GVYLKSLTAKP 217
GV++ T KP
Sbjct: 299 GVHVLEGTVKP 309
Score = 70.9 bits (172), Expect = 1e-10
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 AGHYGSINDW--SPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYL 175
+G+YG I SP +I+SLTF ++R YGPFG + G F+ + GK+VGFHGRSS Y+
Sbjct: 434 SGYYGPIGSDGNSPKVIKSLTFHTSRGNYGPFGEEIGTFFTSTTTEGKVVGFHGRSSAYM 493
Query: 176 DSVGVYLK 199
D++GV+++
Sbjct: 494 DAIGVHMQ 501
>ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like At1g52040-like [Glycine
max]
Length = 594
Score = 130 bits (326), Expect = 1e-28
Identities = 57/106 (53%), Positives = 78/106 (73%)
Frame = +2
Query: 5 GHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDSV 184
G+YGS+N W P+ IRSL+F+SN+K YGPFG ++G FS M GGKI+GFHGR W+LD++
Sbjct: 89 GYYGSLNQWGPIFIRSLSFESNKKLYGPFGVEQGTYFSLPMTGGKIIGFHGRYGWHLDAI 148
Query: 185 GVYLKSLTAKPNLSSKALVSSQSFVANGTDKFGYNVVQGSVGQNYD 322
G+ +KS ++ SKAL SQ+++ N D Y+V+QGSVGQ YD
Sbjct: 149 GINVKS--SQQQKPSKALSFSQNYMTNTNDNASYSVIQGSVGQGYD 192
Score = 76.6 bits (187), Expect = 2e-12
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 AGHYGSIN-DWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLD 178
+G+YGSI D P++I+SLTF ++R YGPFG + G F+ + GK+VG HGRSS YLD
Sbjct: 510 SGYYGSITADEQPIIIKSLTFHTSRGQYGPFGDEVGKYFTSTTTEGKVVGLHGRSSMYLD 569
Query: 179 SVGVYLK 199
++GV+++
Sbjct: 570 AIGVHMQ 576
Score = 73.2 bits (178), Expect = 2e-11
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +2
Query: 2 AGHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDS 181
+G+YGS+ P +IRSLTF + ++ YGPFG + G F+ + GK+VG HGRS +LDS
Sbjct: 315 SGYYGSLMYMGPAVIRSLTFHTTKRPYGPFGDEYGTYFTTKLREGKVVGIHGRSGLFLDS 374
Query: 182 VGVY 193
+GV+
Sbjct: 375 LGVH 378
>ref|XP_003615697.1| Myrosinase-binding protein-like protein [Medicago truncatula]
gi|355517032|gb|AES98655.1| Myrosinase-binding
protein-like protein [Medicago truncatula]
Length = 604
Score = 128 bits (322), Expect = 4e-28
Identities = 62/106 (58%), Positives = 80/106 (75%)
Frame = +2
Query: 5 GHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDSV 184
G+YGS+N W L+RSL+F+SN+KTYGPFG ++G FS M G KIVGFHGR WYLD++
Sbjct: 92 GYYGSLNQWGHNLVRSLSFESNKKTYGPFGVEQGTYFSVPMTGAKIVGFHGRCGWYLDAI 151
Query: 185 GVYLKSLTAKPNLSSKALVSSQSFVANGTDKFGYNVVQGSVGQNYD 322
GVY+KSL +PN +KAL S V N ++ FGY+V+QG+V QNYD
Sbjct: 152 GVYMKSL-KQPN-PAKALHHS-DHVNNTSENFGYSVIQGTVNQNYD 194
Score = 72.0 bits (175), Expect = 5e-11
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +2
Query: 2 AGHYGSIN-DWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLD 178
+G+YGSI D +I+SLTF ++R YGP+G + G F+ + GK+VGFHGRSS YLD
Sbjct: 521 SGYYGSITKDEKHTVIKSLTFHTSRGQYGPYGEEVGKFFTSTTTEGKVVGFHGRSSLYLD 580
Query: 179 SVGVYLKSLTAKPNLSSKAL 238
++G++++ S +L
Sbjct: 581 AIGIHMQHWLGSQKTSRSSL 600
Score = 67.8 bits (164), Expect = 9e-10
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +2
Query: 2 AGHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDS 181
+G++G + P +IRSLTF + ++ YGPFG ++G F+ + GKIVG HGR +LD+
Sbjct: 324 SGYHGPLMYMGPAVIRSLTFHTTKRKYGPFGEEQGTYFTTKVKEGKIVGIHGRKGLFLDA 383
Query: 182 VGVYL 196
GV++
Sbjct: 384 FGVHV 388
>ref|XP_003552950.1| PREDICTED: agglutinin-like [Glycine max]
Length = 604
Score = 128 bits (321), Expect = 6e-28
Identities = 60/106 (56%), Positives = 79/106 (74%)
Frame = +2
Query: 5 GHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDSV 184
G+YGS++ W P+ IRSL+F+SN+K YGPFG ++G FS M GGKIVGFHGR W+LD++
Sbjct: 99 GYYGSLSQWGPIFIRSLSFESNKKLYGPFGVEQGTYFSLPMTGGKIVGFHGRYGWHLDAI 158
Query: 185 GVYLKSLTAKPNLSSKALVSSQSFVANGTDKFGYNVVQGSVGQNYD 322
GV LKS ++ SKAL SQ+ + N TD Y+V+QGSVGQ+YD
Sbjct: 159 GVNLKS--SQQPKPSKALSYSQNNMTNTTDNGRYSVIQGSVGQDYD 202
Score = 76.3 bits (186), Expect = 3e-12
Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 AGHYGSIN-DWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLD 178
+G+YGS+ D P++I+SLTF ++R YGPFG + G F+ + GK+VG HGRSS YLD
Sbjct: 520 SGYYGSVTADEQPIIIKSLTFHTSRGQYGPFGDEVGKYFTSTTTEGKVVGLHGRSSMYLD 579
Query: 179 SVGVYLK 199
++GV+++
Sbjct: 580 AIGVHMQ 586
Score = 73.9 bits (180), Expect = 1e-11
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = +2
Query: 2 AGHYGSINDWSPVLIRSLTFQSNRKTYGPFGTQEGNQFSFSMNGGKIVGFHGRSSWYLDS 181
+G+YGS+ P +IRSLTF + +++YGPFG + G F+ + GK+VG HGRS +LDS
Sbjct: 325 SGYYGSLMYMGPAVIRSLTFHTTKRSYGPFGDEYGTYFTTKLREGKVVGIHGRSGLFLDS 384
Query: 182 VGVY 193
+GV+
Sbjct: 385 LGVH 388