BLASTX nr result
ID: Coptis25_contig00034750
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034750 (935 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2... 414 e-113 ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi... 399 e-109 ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ... 370 e-100 ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi... 224 3e-56 gb|ACU18704.1| unknown [Glycine max] 224 3e-56 >ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1| predicted protein [Populus trichocarpa] Length = 484 Score = 414 bits (1064), Expect = e-113 Identities = 204/311 (65%), Positives = 244/311 (78%) Frame = +2 Query: 2 SNLVLQTLMNYRHLGRRTTLEFFSWAGFEMGFCFEDSVIEYMADFLGRRKLFDDLKCLLK 181 S++VLQ LMNY+ LGR TLEFFSWAG +MGF F+D VIEYM DFLGRRKLFDD+KC L Sbjct: 4 SDIVLQVLMNYKQLGRVKTLEFFSWAGMQMGFKFDDCVIEYMVDFLGRRKLFDDMKCFLM 63 Query: 182 TVYLSKGCVSCRTVSVCIRFLGREGRIKDALCLFEEMEVELNCKPDNFVCNNMLYVLCKK 361 TV G V+CR S+CIRFLGR+GR ++ALCLF+EME + NC+PDNFV NNMLYVLCKK Sbjct: 64 TVLFHNGRVTCRAFSICIRFLGRQGRFREALCLFQEMETKFNCRPDNFVYNNMLYVLCKK 123 Query: 362 ETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSANLVPTKSAV 541 +TSGE ID AL IFR IESPD YSYSN+LVGLCKFGR E+A+E F EM A LVPT+SAV Sbjct: 124 DTSGELIDVALSIFRGIESPDTYSYSNVLVGLCKFGRFETAIEFFQEMGRARLVPTRSAV 183 Query: 542 NFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWLMGDLGLFP 721 NFL+ +LC L+ E + VRV + R+P+TILVPNVG GAI AV +F + DLGL P Sbjct: 184 NFLMRELCLLSAKEGAVNEVRVHSSRKPYTILVPNVGPKSGAIRPAVGVFLAVCDLGLLP 243 Query: 722 SPFIINQLISELCRLRKIDEAMEIFWVVEKKRLNCLEESYTIVIRALCDVRRVEEACQLF 901 S F+I QLI+ELCRL K+ EA EI VVE+++ NC+ E Y+IV++ALC+ R VEEA LF Sbjct: 244 STFVIIQLITELCRLGKMTEAFEILKVVEERKQNCVAEGYSIVMQALCEYRLVEEASHLF 303 Query: 902 GQMLSQELKPK 934 G+MLS ELKPK Sbjct: 304 GRMLSLELKPK 314 >ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like [Cucumis sativus] gi|449484825|ref|XP_004156991.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like [Cucumis sativus] Length = 579 Score = 399 bits (1025), Expect = e-109 Identities = 195/311 (62%), Positives = 237/311 (76%) Frame = +2 Query: 2 SNLVLQTLMNYRHLGRRTTLEFFSWAGFEMGFCFEDSVIEYMADFLGRRKLFDDLKCLLK 181 S+ VLQ LMNY+ LGR TLEFFSW+G +MGF F+ SV+EYMADFLGRRKLFDD+KCLL Sbjct: 99 SDFVLQILMNYKLLGRAKTLEFFSWSGLQMGFRFDASVVEYMADFLGRRKLFDDMKCLLV 158 Query: 182 TVYLSKGCVSCRTVSVCIRFLGREGRIKDALCLFEEMEVELNCKPDNFVCNNMLYVLCKK 361 TV KG +SCRT S+CIRFLGR+GR+++ALCLFEEME + CKPDN V NNMLY LCKK Sbjct: 159 TVLSHKGRISCRTFSICIRFLGRQGRVREALCLFEEMEPKFGCKPDNLVFNNMLYALCKK 218 Query: 362 ETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSANLVPTKSAV 541 E +GE ID AL IFR+IE PD YSYSN+++GLCKFGR +A+E F EM A LVPT++AV Sbjct: 219 EPTGELIDTALKIFRRIELPDKYSYSNVIIGLCKFGRYSTAIEAFGEMYRAGLVPTRTAV 278 Query: 542 NFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWLMGDLGLFP 721 N LIG LC L+ E +E+VRV + RPFT+LVPNV GAI AV IFW L L P Sbjct: 279 NILIGNLCSLSAKEGAVEKVRVNSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVP 338 Query: 722 SPFIINQLISELCRLRKIDEAMEIFWVVEKKRLNCLEESYTIVIRALCDVRRVEEACQLF 901 S F+ QLISELCRL ++ EA+ + VVE +L C EE Y++V++ALC+ R V+EA LF Sbjct: 339 SSFVTVQLISELCRLGQMQEAIRVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLF 398 Query: 902 GQMLSQELKPK 934 G+MLSQ +KPK Sbjct: 399 GRMLSQGMKPK 409 >ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355499354|gb|AES80557.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 578 Score = 370 bits (951), Expect = e-100 Identities = 181/311 (58%), Positives = 238/311 (76%) Frame = +2 Query: 2 SNLVLQTLMNYRHLGRRTTLEFFSWAGFEMGFCFEDSVIEYMADFLGRRKLFDDLKCLLK 181 S+LVL+ LM+Y HLGR TL+FFSWAG +M F F+DSVIEYM DF GRRKLFDD+KCLL Sbjct: 100 SDLVLRVLMSYNHLGRTKTLKFFSWAGTKMDFQFDDSVIEYMVDFFGRRKLFDDIKCLLM 159 Query: 182 TVYLSKGCVSCRTVSVCIRFLGREGRIKDALCLFEEMEVELNCKPDNFVCNNMLYVLCKK 361 T+ KG VS + +S+CIRFLGREGRI + L LF+EME CKPDN VCNN+LYVLCKK Sbjct: 160 TIVAHKGQVSSKALSICIRFLGREGRINEVLSLFDEMESVFGCKPDNLVCNNVLYVLCKK 219 Query: 362 ETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSANLVPTKSAV 541 ++S E I+ AL IF KIESPD YS SN++VGLC+ GR E+A+E+F +M + PT+SA+ Sbjct: 220 QSSEEMIELALSIFDKIESPDTYSCSNMIVGLCRLGRFEAALEIFRKMDRVGVHPTRSAM 279 Query: 542 NFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWLMGDLGLFP 721 N LIG LC ++ E +E+V+V RRP++ILVPN+G + AI AV++F + + GL P Sbjct: 280 NVLIGDLCLMSAKEGSVEKVKVTKTRRPYSILVPNMGGNRAAIQPAVEVFSAVVNSGLLP 339 Query: 722 SPFIINQLISELCRLRKIDEAMEIFWVVEKKRLNCLEESYTIVIRALCDVRRVEEACQLF 901 S F++ +L+SELCRL +EA+++ +VE+K+L C++E Y+IVI+ALCD RRVEEA +LF Sbjct: 340 STFVVFRLMSELCRLGNTEEAVKVLRIVEEKKLTCVQEGYSIVIKALCDHRRVEEAGKLF 399 Query: 902 GQMLSQELKPK 934 G+ML LKPK Sbjct: 400 GRMLEIGLKPK 410 >ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like [Glycine max] Length = 367 Score = 224 bits (570), Expect = 3e-56 Identities = 110/199 (55%), Positives = 150/199 (75%) Frame = +2 Query: 338 MLYVLCKKETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSAN 517 MLYVLCK+E+S E I+ AL IF KI++PD YS SN++VGLCK GR+ESA+E+F M Sbjct: 1 MLYVLCKRESSLEMIELALSIFHKIDAPDTYSCSNMIVGLCKLGRLESALEIFDRMNRIG 60 Query: 518 LVPTKSAVNFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWL 697 ++PT+SAVN LIG+LC ++ E +E+VRVRN RRP+TILVPN+G + GAI AV++FW Sbjct: 61 VLPTRSAVNLLIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFWA 120 Query: 698 MGDLGLFPSPFIINQLISELCRLRKIDEAMEIFWVVEKKRLNCLEESYTIVIRALCDVRR 877 + GL PS F++ +L+SELCRL EA+ + +VE+++L ++E Y++VI ALC+ R Sbjct: 121 VCSSGLLPSAFVVVKLMSELCRLGNTVEAVRVLRIVEERKLTSVQEGYSVVINALCECCR 180 Query: 878 VEEACQLFGQMLSQELKPK 934 VEEA LFG+MLS LKPK Sbjct: 181 VEEASDLFGRMLSCGLKPK 199 >gb|ACU18704.1| unknown [Glycine max] Length = 367 Score = 224 bits (570), Expect = 3e-56 Identities = 110/199 (55%), Positives = 150/199 (75%) Frame = +2 Query: 338 MLYVLCKKETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSAN 517 MLYVLCK+E+S E I+ AL IF KI++PD YS SN++VGLCK GR+ESA+E+F M Sbjct: 1 MLYVLCKRESSLEMIELALSIFHKIDAPDTYSCSNMIVGLCKLGRLESALEIFDRMNRIG 60 Query: 518 LVPTKSAVNFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWL 697 ++PT+SAVN LIG+LC ++ E +E+VRVRN RRP+TILVPN+G + GAI AV++FW Sbjct: 61 VLPTRSAVNLLIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFWA 120 Query: 698 MGDLGLFPSPFIINQLISELCRLRKIDEAMEIFWVVEKKRLNCLEESYTIVIRALCDVRR 877 + GL PS F++ +L+SELCRL EA+ + +VE+++L ++E Y++VI ALC+ R Sbjct: 121 VCSSGLLPSAFVVVKLMSELCRLGNTVEAVRVLRIVEERKLTSVQEGYSVVINALCECCR 180 Query: 878 VEEACQLFGQMLSQELKPK 934 VEEA LFG+MLS LKPK Sbjct: 181 VEEASDLFGRMLSCGLKPK 199