BLASTX nr result

ID: Coptis25_contig00034748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034748
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520344.1| kinesin heavy chain, putative [Ricinus commu...   185   3e-45
ref|XP_002300974.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
ref|XP_002284508.2| PREDICTED: uncharacterized protein LOC100248...   179   3e-43
emb|CBI18998.3| unnamed protein product [Vitis vinifera]              179   3e-43
ref|XP_002447861.1| hypothetical protein SORBIDRAFT_06g017070 [S...   176   2e-42

>ref|XP_002520344.1| kinesin heavy chain, putative [Ricinus communis]
           gi|223540563|gb|EEF42130.1| kinesin heavy chain,
           putative [Ricinus communis]
          Length = 1071

 Score =  185 bits (470), Expect = 3e-45
 Identities = 93/101 (92%), Positives = 99/101 (98%)
 Frame = +1

Query: 1   SDLRGDSQGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD 180
           S  RG+S+GEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD
Sbjct: 302 SSPRGESEGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD 361

Query: 181 GKATHVPYRDSKLTRLLQSSLSGHGRVSIICTVTPASSNSE 303
           GK+TH+PYRDSKLTRLLQSSLSGHGR+S+ICTVTPASSNSE
Sbjct: 362 GKSTHIPYRDSKLTRLLQSSLSGHGRISLICTVTPASSNSE 402


>ref|XP_002300974.1| predicted protein [Populus trichocarpa] gi|222842700|gb|EEE80247.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  181 bits (458), Expect = 7e-44
 Identities = 93/97 (95%), Positives = 95/97 (97%)
 Frame = +1

Query: 13  GDSQGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTDGKAT 192
           G+ QGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD KAT
Sbjct: 281 GEYQGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTDEKAT 340

Query: 193 HVPYRDSKLTRLLQSSLSGHGRVSIICTVTPASSNSE 303
           HVPYRDSKLTRLLQSSLSGHGRVS+ICTVTPASSNSE
Sbjct: 341 HVPYRDSKLTRLLQSSLSGHGRVSLICTVTPASSNSE 377


>ref|XP_002284508.2| PREDICTED: uncharacterized protein LOC100248995 [Vitis vinifera]
          Length = 1119

 Score =  179 bits (453), Expect = 3e-43
 Identities = 91/101 (90%), Positives = 96/101 (95%)
 Frame = +1

Query: 1   SDLRGDSQGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD 180
           S   G+ +GEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD
Sbjct: 278 SSPHGEIEGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD 337

Query: 181 GKATHVPYRDSKLTRLLQSSLSGHGRVSIICTVTPASSNSE 303
            KATH+PYRDSKLTRLLQSSLSGHGRVS+ICTVTPASSN+E
Sbjct: 338 DKATHIPYRDSKLTRLLQSSLSGHGRVSLICTVTPASSNTE 378


>emb|CBI18998.3| unnamed protein product [Vitis vinifera]
          Length = 1144

 Score =  179 bits (453), Expect = 3e-43
 Identities = 91/101 (90%), Positives = 96/101 (95%)
 Frame = +1

Query: 1   SDLRGDSQGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD 180
           S   G+ +GEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD
Sbjct: 278 SSPHGEIEGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTD 337

Query: 181 GKATHVPYRDSKLTRLLQSSLSGHGRVSIICTVTPASSNSE 303
            KATH+PYRDSKLTRLLQSSLSGHGRVS+ICTVTPASSN+E
Sbjct: 338 DKATHIPYRDSKLTRLLQSSLSGHGRVSLICTVTPASSNTE 378


>ref|XP_002447861.1| hypothetical protein SORBIDRAFT_06g017070 [Sorghum bicolor]
           gi|241939044|gb|EES12189.1| hypothetical protein
           SORBIDRAFT_06g017070 [Sorghum bicolor]
          Length = 1030

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/97 (89%), Positives = 95/97 (97%)
 Frame = +1

Query: 13  GDSQGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTDGKAT 192
           G+++ EE+V LSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVI+KLTDGKAT
Sbjct: 198 GENEAEEEVKLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIAKLTDGKAT 257

Query: 193 HVPYRDSKLTRLLQSSLSGHGRVSIICTVTPASSNSE 303
           H+PYRDSKLTRLLQSSLSGHGR+S+ICTVTPASSNSE
Sbjct: 258 HIPYRDSKLTRLLQSSLSGHGRISLICTVTPASSNSE 294


Top