BLASTX nr result
ID: Coptis25_contig00034741
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034741 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223... 73 3e-11 ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera] 72 6e-11 emb|CBI19854.3| unnamed protein product [Vitis vinifera] 72 6e-11 ref|XP_002889075.1| predicted protein [Arabidopsis lyrata subsp.... 68 9e-10 >ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|222857240|gb|EEE94787.1| predicted protein [Populus trichocarpa] Length = 436 Score = 76.6 bits (187), Expect = 2e-12 Identities = 40/68 (58%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Frame = -1 Query: 202 MGRNDENNPGVIGPAISQGGLRMR-GKIGLEPGQNRRVLSEINWNIVGVALYPCVVNKRG 26 M +DENNPGVIGP Q GLR R GK + G NRR LS IN NI+G YPC VNKRG Sbjct: 1 MAGSDENNPGVIGPGNIQEGLRGRVGKFPVATGTNRRALSNINRNIIGGPPYPCAVNKRG 60 Query: 25 LIEKHVIC 2 L E+ C Sbjct: 61 LSEREAFC 68 >ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223551376|gb|EEF52862.1| cyclin B, putative [Ricinus communis] Length = 438 Score = 72.8 bits (177), Expect = 3e-11 Identities = 40/71 (56%), Positives = 43/71 (60%), Gaps = 4/71 (5%) Frame = -1 Query: 202 MGRNDENNPGVIGPAISQGGLRMR-GKI---GLEPGQNRRVLSEINWNIVGVALYPCVVN 35 M +DENNPGVIGP QGGLR GK G NRR LS IN NI+G YPC VN Sbjct: 1 MAGSDENNPGVIGPVNVQGGLRAGVGKFTAAAATTGNNRRALSSINRNIIGAPPYPCAVN 60 Query: 34 KRGLIEKHVIC 2 KRG E+ IC Sbjct: 61 KRGPSERQAIC 71 >ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera] Length = 437 Score = 71.6 bits (174), Expect = 6e-11 Identities = 40/66 (60%), Positives = 43/66 (65%), Gaps = 3/66 (4%) Frame = -1 Query: 190 DENNPGV--IGPAISQGGLRMR-GKIGLEPGQNRRVLSEINWNIVGVALYPCVVNKRGLI 20 DENNPGV IGPA +QGGLR GK G NRR LS I+ NI+GV YPC VNKR L Sbjct: 5 DENNPGVGVIGPANNQGGLRAGVGKFTTGIGHNRRALSSIDRNIIGVPPYPCAVNKRALS 64 Query: 19 EKHVIC 2 EK C Sbjct: 65 EKEAAC 70 >emb|CBI19854.3| unnamed protein product [Vitis vinifera] Length = 441 Score = 71.6 bits (174), Expect = 6e-11 Identities = 40/66 (60%), Positives = 43/66 (65%), Gaps = 3/66 (4%) Frame = -1 Query: 190 DENNPGV--IGPAISQGGLRMR-GKIGLEPGQNRRVLSEINWNIVGVALYPCVVNKRGLI 20 DENNPGV IGPA +QGGLR GK G NRR LS I+ NI+GV YPC VNKR L Sbjct: 5 DENNPGVGVIGPANNQGGLRAGVGKFTTGIGHNRRALSSIDRNIIGVPPYPCAVNKRALS 64 Query: 19 EKHVIC 2 EK C Sbjct: 65 EKEAAC 70 >ref|XP_002889075.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297334916|gb|EFH65334.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 432 Score = 67.8 bits (164), Expect = 9e-10 Identities = 35/67 (52%), Positives = 40/67 (59%) Frame = -1 Query: 202 MGRNDENNPGVIGPAISQGGLRMRGKIGLEPGQNRRVLSEINWNIVGVALYPCVVNKRGL 23 MG +DEN GVIGP Q G GK+ GQ RR LS IN NI+G +YPC VNKR Sbjct: 1 MGGSDENRHGVIGPMNRQQGSLRGGKVIPTNGQTRRALSNINKNIIGAPVYPCAVNKRPF 60 Query: 22 IEKHVIC 2 E + IC Sbjct: 61 TENNGIC 67